Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_B07
         (504 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70279-6|CAA94244.2|  720|Caenorhabditis elegans Hypothetical pr...    28   3.3  
AL023841-4|CAC42359.1|  720|Caenorhabditis elegans Hypothetical ...    28   3.3  
Z68493-7|CAA92793.1|  339|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z82078-3|CAB04942.1|  313|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z81027-2|CAB02687.1|  282|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>Z70279-6|CAA94244.2|  720|Caenorhabditis elegans Hypothetical
           protein K11E8.1c protein.
          Length = 720

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +1

Query: 133 PLSAKKFKMWLLLLFELSYIVG*SKTIANINRQKKTTPSNCFENKICN 276
           P  + K K++  LLFE+      S  +   N +    P +CF NK+ N
Sbjct: 378 PKESSKKKLFFTLLFEVCPHTSRSHILLRDNTKNIYHPYHCFTNKMSN 425


>AL023841-4|CAC42359.1|  720|Caenorhabditis elegans Hypothetical
           protein K11E8.1c protein.
          Length = 720

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +1

Query: 133 PLSAKKFKMWLLLLFELSYIVG*SKTIANINRQKKTTPSNCFENKICN 276
           P  + K K++  LLFE+      S  +   N +    P +CF NK+ N
Sbjct: 378 PKESSKKKLFFTLLFEVCPHTSRSHILLRDNTKNIYHPYHCFTNKMSN 425


>Z68493-7|CAA92793.1|  339|Caenorhabditis elegans Hypothetical
           protein C33A12.10 protein.
          Length = 339

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 11/49 (22%), Positives = 25/49 (51%)
 Frame = -2

Query: 296 HAVHIYLLHILFSKQFEGVVFFCLLMFAIVLDYPTI*DNSKSNNNHILN 150
           +   +Y+ +    + F   + FC++ +A  L +P+  +N   N+N I +
Sbjct: 280 YGTSVYISYSEIIRSFGNDLQFCVVTWAFYLTHPSFRNNQSVNSNKIFS 328


>Z82078-3|CAB04942.1|  313|Caenorhabditis elegans Hypothetical
           protein W09D6.2 protein.
          Length = 313

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -3

Query: 328 LNAYNFL*QYCMLFTFTYCIFY 263
           L +Y FL  Y  LF FTY I Y
Sbjct: 35  LGSYKFLMIYINLFEFTYAILY 56


>Z81027-2|CAB02687.1|  282|Caenorhabditis elegans Hypothetical
           protein AH10.3 protein.
          Length = 282

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -1

Query: 372 HINVWIKREPELVSNLMPITFFDNIACCSHLPIAYFILETIRRCS 238
           H+  W K+       L+ + FF+N A  S+ PI Y + +    CS
Sbjct: 118 HLQYWSKK------CLLELIFFENFARLSNFPIGYILCQHCVCCS 156


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,231,893
Number of Sequences: 27780
Number of extensions: 197069
Number of successful extensions: 454
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)