Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_B02
         (603 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   0.86 
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    23   2.6  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    23   2.6  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    23   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 0.86
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +1

Query: 4   LHGLVMGVFTIREIIFIYCNK*TMMNVNVIHLLLHY 111
           +H +V  VF    ++F YC    +   N    L HY
Sbjct: 490 IHLIVRSVFVTTYLMFDYCTVLRVQRFNNYQSLAHY 525


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -2

Query: 296 FGGYYCPCHGSHYDASGRIRKGPAPLNLEVPPHTFMDEG 180
           F G+Y P + SH D +   +     LN+      ++DEG
Sbjct: 217 FVGHYAPLYASHLDQTDEQK----TLNVAAGIQYWLDEG 251


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -2

Query: 296 FGGYYCPCHGSHYDASGRIRKGPAPLNLEVPPHTFMDEG 180
           F G+Y P + SH D +   +     LN+      ++DEG
Sbjct: 218 FVGHYAPLYASHLDQTDEQK----TLNVAAGIQYWLDEG 252


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -2

Query: 296 FGGYYCPCHGSHYDASGRIRKGPAPLNLEVPPHTFMDEG 180
           F G+Y P + SH D +   +     LN+      ++DEG
Sbjct: 218 FVGHYAPLYASHLDQTDEQK----TLNVAAGIQYWLDEG 252


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 470 PLFIRHRTADEISTEKAVPVDTLRDPQHDDQ 378
           P F R R+  +     +  V+T+ DP+ DD+
Sbjct: 146 PSFARGRSLYDSRGRHSEIVETVYDPREDDR 176


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/33 (21%), Positives = 20/33 (60%)
 Frame = +1

Query: 4   LHGLVMGVFTIREIIFIYCNK*TMMNVNVIHLL 102
           +  ++M   T+ +++FI+C+   ++ +  I +L
Sbjct: 75  IFNILMKNVTLNDVVFIFCSAPIIITILDIEIL 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,548
Number of Sequences: 336
Number of extensions: 3389
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)