Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_B02
         (603 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L32977-1|AAC41754.1|  274|Homo sapiens Rieske Fe-S protein protein.   240   2e-63
BC067832-1|AAH67832.1|  274|Homo sapiens ubiquinol-cytochrome c ...   240   2e-63
BC010035-1|AAH10035.1|  274|Homo sapiens ubiquinol-cytochrome c ...   240   2e-63
BC000649-1|AAH00649.1|  274|Homo sapiens ubiquinol-cytochrome c ...   240   2e-63
AC007786-1|AAD38242.1|  274|Homo sapiens UCRI_HUMAN protein.          240   2e-63
Z82206-1|CAI42711.1|  272|Homo sapiens ubiquinol-cytochrome c re...   237   2e-62
AB015334-1|BAA34793.1|  123|Homo sapiens HRIHFB2099 protein.           30   7.2  

>L32977-1|AAC41754.1|  274|Homo sapiens Rieske Fe-S protein protein.
          Length = 274

 Score =  240 bits (588), Expect = 2e-63
 Identities = 104/146 (71%), Positives = 124/146 (84%)
 Frame = -2

Query: 602 AXSVVTHFVSSMSAAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRTADEISTEK 423
           A + VT FVSSMSA+ADVLALAKIEIKL++IPEGK++ FKWRGKPLF+RHRT  EI  E 
Sbjct: 129 AKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEA 188

Query: 422 AVPVDTLRDPQHDDQRTQNPKWLVVIGVCTHLGCVPVANAGEFGGYYCPCHGSHYDASGR 243
           AV +  LRDPQHD  R + P+W+++IGVCTHLGCVP+ANAG+FGGYYCPCHGSHYDASGR
Sbjct: 189 AVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGR 248

Query: 242 IRKGPAPLNLEVPPHTFMDEGLLVVG 165
           IR GPAPLNLEVP + F  + +++VG
Sbjct: 249 IRLGPAPLNLEVPTYEFTSDDMVIVG 274


>BC067832-1|AAH67832.1|  274|Homo sapiens ubiquinol-cytochrome c
           reductase, Rieske iron-sulfur polypeptide 1 protein.
          Length = 274

 Score =  240 bits (588), Expect = 2e-63
 Identities = 104/146 (71%), Positives = 124/146 (84%)
 Frame = -2

Query: 602 AXSVVTHFVSSMSAAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRTADEISTEK 423
           A + VT FVSSMSA+ADVLALAKIEIKL++IPEGK++ FKWRGKPLF+RHRT  EI  E 
Sbjct: 129 AKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEA 188

Query: 422 AVPVDTLRDPQHDDQRTQNPKWLVVIGVCTHLGCVPVANAGEFGGYYCPCHGSHYDASGR 243
           AV +  LRDPQHD  R + P+W+++IGVCTHLGCVP+ANAG+FGGYYCPCHGSHYDASGR
Sbjct: 189 AVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGR 248

Query: 242 IRKGPAPLNLEVPPHTFMDEGLLVVG 165
           IR GPAPLNLEVP + F  + +++VG
Sbjct: 249 IRLGPAPLNLEVPTYEFTSDDMVIVG 274


>BC010035-1|AAH10035.1|  274|Homo sapiens ubiquinol-cytochrome c
           reductase, Rieske iron-sulfur polypeptide 1 protein.
          Length = 274

 Score =  240 bits (588), Expect = 2e-63
 Identities = 104/146 (71%), Positives = 124/146 (84%)
 Frame = -2

Query: 602 AXSVVTHFVSSMSAAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRTADEISTEK 423
           A + VT FVSSMSA+ADVLALAKIEIKL++IPEGK++ FKWRGKPLF+RHRT  EI  E 
Sbjct: 129 AKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEA 188

Query: 422 AVPVDTLRDPQHDDQRTQNPKWLVVIGVCTHLGCVPVANAGEFGGYYCPCHGSHYDASGR 243
           AV +  LRDPQHD  R + P+W+++IGVCTHLGCVP+ANAG+FGGYYCPCHGSHYDASGR
Sbjct: 189 AVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGR 248

Query: 242 IRKGPAPLNLEVPPHTFMDEGLLVVG 165
           IR GPAPLNLEVP + F  + +++VG
Sbjct: 249 IRLGPAPLNLEVPTYEFTSDDMVIVG 274


>BC000649-1|AAH00649.1|  274|Homo sapiens ubiquinol-cytochrome c
           reductase, Rieske iron-sulfur polypeptide 1 protein.
          Length = 274

 Score =  240 bits (588), Expect = 2e-63
 Identities = 104/146 (71%), Positives = 124/146 (84%)
 Frame = -2

Query: 602 AXSVVTHFVSSMSAAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRTADEISTEK 423
           A + VT FVSSMSA+ADVLALAKIEIKL++IPEGK++ FKWRGKPLF+RHRT  EI  E 
Sbjct: 129 AKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEA 188

Query: 422 AVPVDTLRDPQHDDQRTQNPKWLVVIGVCTHLGCVPVANAGEFGGYYCPCHGSHYDASGR 243
           AV +  LRDPQHD  R + P+W+++IGVCTHLGCVP+ANAG+FGGYYCPCHGSHYDASGR
Sbjct: 189 AVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGR 248

Query: 242 IRKGPAPLNLEVPPHTFMDEGLLVVG 165
           IR GPAPLNLEVP + F  + +++VG
Sbjct: 249 IRLGPAPLNLEVPTYEFTSDDMVIVG 274


>AC007786-1|AAD38242.1|  274|Homo sapiens UCRI_HUMAN protein.
          Length = 274

 Score =  240 bits (588), Expect = 2e-63
 Identities = 104/146 (71%), Positives = 124/146 (84%)
 Frame = -2

Query: 602 AXSVVTHFVSSMSAAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRTADEISTEK 423
           A + VT FVSSMSA+ADVLALAKIEIKL++IPEGK++ FKWRGKPLF+RHRT  EI  E 
Sbjct: 129 AKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEA 188

Query: 422 AVPVDTLRDPQHDDQRTQNPKWLVVIGVCTHLGCVPVANAGEFGGYYCPCHGSHYDASGR 243
           AV +  LRDPQHD  R + P+W+++IGVCTHLGCVP+ANAG+FGGYYCPCHGSHYDASGR
Sbjct: 189 AVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGR 248

Query: 242 IRKGPAPLNLEVPPHTFMDEGLLVVG 165
           IR GPAPLNLEVP + F  + +++VG
Sbjct: 249 IRLGPAPLNLEVPTYEFTSDDMVIVG 274


>Z82206-1|CAI42711.1|  272|Homo sapiens ubiquinol-cytochrome c
           reductase, Rieske iron-sulfur polypeptide-like 1
           protein.
          Length = 272

 Score =  237 bits (580), Expect = 2e-62
 Identities = 103/146 (70%), Positives = 123/146 (84%)
 Frame = -2

Query: 602 AXSVVTHFVSSMSAAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRTADEISTEK 423
           A + VT FVSSMSA+ADVLALAKIEIKL++IPEGK++ FKWRGKPLF+RHRT  EI  E 
Sbjct: 127 AKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIKQEA 186

Query: 422 AVPVDTLRDPQHDDQRTQNPKWLVVIGVCTHLGCVPVANAGEFGGYYCPCHGSHYDASGR 243
           AV +  LRDPQHD  R + P+W+++IGVCTHLGCVP+ANAG+FGGYYCPCHGSHYDASGR
Sbjct: 187 AVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGR 246

Query: 242 IRKGPAPLNLEVPPHTFMDEGLLVVG 165
           IR GPA LNLEVP + F  + +++VG
Sbjct: 247 IRLGPATLNLEVPTYEFTSDDMVIVG 272


>AB015334-1|BAA34793.1|  123|Homo sapiens HRIHFB2099 protein.
          Length = 123

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = -3

Query: 241 SAKAPPPST*KC-PPTRSWTKAC 176
           SA  P P+T  C PP+ SW++AC
Sbjct: 35  SAPPPAPATDMCHPPSESWSRAC 57


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,913,569
Number of Sequences: 237096
Number of extensions: 2084222
Number of successful extensions: 8047
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8047
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)