Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_B01
         (804 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.93 
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    22   6.6  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   6.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.93
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +1

Query: 61   GHLPSCR-FRCPNRNRLRPPSVPQHYQ 138
            GH PS   ++ P +   RPPS   H+Q
Sbjct: 1158 GHKPSTSSWQKPTKPSYRPPSTTNHWQ 1184


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 523 CEICKTSMTCSEQMTMHL 470
           C +CK + + S  +T HL
Sbjct: 80  CRLCKKAFSDSSTLTKHL 97


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 523 CEICKTSMTCSEQMTMHL 470
           C +CK + + S  +T HL
Sbjct: 336 CRLCKKAFSDSSTLTKHL 353


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = -3

Query: 529 LYCEICKTSMTCSEQMTMHLNGKRH 455
           L C  CK S      MT H+   +H
Sbjct: 378 LKCVWCKQSFPSLAAMTTHMKEAKH 402


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,446
Number of Sequences: 336
Number of extensions: 2647
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)