Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_B01
(804 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0155 - 15185985-15186755,15187049-15187236,15187479-151875... 40 0.002
01_05_0484 - 22621614-22621676,22621798-22621911,22622006-226224... 40 0.003
09_04_0154 - 15180921-15181811,15181986-15182070,15182205-15182419 38 0.009
06_03_0953 - 26277946-26278800,26280177-26280676,26280735-26280849 37 0.022
06_01_0817 - 6185881-6187074 34 0.15
09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351 33 0.20
08_01_1026 - 10366534-10368021,10368505-10368525 33 0.35
10_08_0433 - 17889072-17889632,17890437-17890514,17892196-17892393 32 0.61
09_06_0031 - 20344594-20344611,20345578-20345813,20345899-203460... 32 0.61
03_06_0561 + 34728428-34728439,34728529-34728615,34728729-347287... 31 1.4
04_03_1022 - 21778315-21779007 29 3.3
10_05_0043 + 8503979-8504407,8506484-8506624,8506865-8506975,850... 29 4.3
01_06_0847 + 32411521-32411619,32411737-32411851,32412292-324123... 29 4.3
06_03_0082 + 16363742-16364632 28 7.6
11_04_0132 - 13804018-13804114,13804196-13804274,13804709-13804880 28 10.0
09_04_0159 + 15213752-15214028,15214158-15214399 28 10.0
08_02_1617 - 28265252-28265354,28266546-28266608,28266943-28267151 28 10.0
07_02_0028 + 11964941-11964991,11965259-11966101,11966249-119665... 28 10.0
01_06_0282 - 28160321-28160417,28160585-28160653,28161090-281611... 28 10.0
>09_04_0155 -
15185985-15186755,15187049-15187236,15187479-15187517,
15187741-15187768
Length = 341
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = -3
Query: 652 CQKSMEGRLEQLIRREKKNLKPIXXXXXXXXXXEAKPISPELY-CEICKTSMTCSEQMTM 476
CQ ++ L+ + + + NL+ ++ +S ELY C++C T +
Sbjct: 229 CQSDLQSHLK--VMKHQLNLRAPSSDGSSFTSATSESLSLELYSCKVCSVKCTFERMLAY 286
Query: 475 HLNGKRHLTKEKQHI---LKMMKCGSE 404
HL GK+HL +E + + ++C SE
Sbjct: 287 HLTGKKHLKQENLQLSCEICKLQCNSE 313
Score = 30.7 bits (66), Expect = 1.4
Identities = 26/112 (23%), Positives = 40/112 (35%), Gaps = 3/112 (2%)
Frame = -3
Query: 772 LYCELCDVHITSKSHADSHYAGRPHRAVVEGRKKPXNTILCQKSMEGRLEQLIRREKKNL 593
L C +C T +S SH H+ + ++ S LE L + ++
Sbjct: 218 LICRVCQAKFTCQSDLQSHLKVMKHQLNLRAPSSDGSSFTSATSESLSLE-LYSCKVCSV 276
Query: 592 KPIXXXXXXXXXXEAKPISPE---LYCEICKTSMTCSEQMTMHLNGKRHLTK 446
K K + E L CEICK + ++ H GK+H K
Sbjct: 277 KCTFERMLAYHLTGKKHLKQENLQLSCEICKLQCNSEKVLSDHRYGKKHQAK 328
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = -3
Query: 802 QKEIPLKSXELYCELCDVHITSKSHADSHYAGRPHRAVVE 683
+K + ++ +L CE+C + S+ H G+ H+A +E
Sbjct: 291 KKHLKQENLQLSCEICKLQCNSEKVLSDHRYGKKHQAKLE 330
Score = 27.9 bits (59), Expect = 10.0
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = -3
Query: 547 KPISPELYCEICKTSMTCSEQMTMHLNGKRH 455
K + L C +C+ TC + HL +H
Sbjct: 212 KAAAATLICRVCQAKFTCQSDLQSHLKVMKH 242
>01_05_0484 -
22621614-22621676,22621798-22621911,22622006-22622453,
22623052-22623179,22623747-22623821,22623954-22624040
Length = 304
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -3
Query: 535 PELYCEICKTSMTCSEQMTMHLNGKRHLTKEK-QHILKMMKCGSENEKKQXAPVKQEKTE 359
P +C +CKT+ T + + H +GK+H K K H + G E K+ ++
Sbjct: 92 PPWFCSLCKTTTTSKQTLLSHADGKKHRAKAKAYHASQKQANGVEQTPKETVGAPVTESA 151
Query: 358 KSNDETAAD 332
+ N+E + +
Sbjct: 152 QVNNERSTE 160
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 769 YCELCDVHITSKSHADSHYAGRPHRA 692
+C LC TSK SH G+ HRA
Sbjct: 95 FCSLCKTTTTSKQTLLSHADGKKHRA 120
>09_04_0154 - 15180921-15181811,15181986-15182070,15182205-15182419
Length = 396
Score = 37.9 bits (84), Expect = 0.009
Identities = 24/107 (22%), Positives = 41/107 (38%)
Frame = -3
Query: 766 CELCDVHITSKSHADSHYAGRPHRAVVEGRKKPXNTILCQKSMEGRLEQLIRREKKNLKP 587
C +C VH + H D+H G+ H+A + + N + S + + N+
Sbjct: 163 CSVCQVHCNGEWHFDTHLKGKRHQANTQALLEQSN----KNSGNSESHDGTKAQPSNVSH 218
Query: 586 IXXXXXXXXXXEAKPISPELYCEICKTSMTCSEQMTMHLNGKRHLTK 446
E + + + C C+ TC + HL G+RH K
Sbjct: 219 HAEKKKRKKKKEEEEEATWI-CRACQAVCTCESDLQNHLRGRRHQLK 264
Score = 30.7 bits (66), Expect = 1.4
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 526 YCEICKTSMTCSEQMTMHLNGKRHL 452
+CE+C T + HL+GK+H+
Sbjct: 363 FCEVCSLKCTSQRMLADHLSGKKHI 387
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 766 CELCDVHITSKSHADSHYAGRPHRAVVEG 680
C +C+V +S+ + HY G+ H++ V G
Sbjct: 104 CAVCEVQTSSERNLRDHYGGQKHQSKVAG 132
>06_03_0953 - 26277946-26278800,26280177-26280676,26280735-26280849
Length = 489
Score = 36.7 bits (81), Expect = 0.022
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = -3
Query: 523 CEICKTSMTCSEQMTMHLNGKRHLTKEKQHILKMMKCGSENEKKQXAPVKQEKTEKSNDE 344
C +C+ S T + HL GKRH K+ CG+ N K +EKT +D
Sbjct: 255 CALCQVSATSEGALNEHLEGKRHKA-------KLAHCGASNAIKDGKSSLKEKTANKDDA 307
Query: 343 TAAD 332
+D
Sbjct: 308 GPSD 311
Score = 36.3 bits (80), Expect = 0.029
Identities = 34/145 (23%), Positives = 54/145 (37%), Gaps = 3/145 (2%)
Frame = -3
Query: 766 CELCDVHITSKSHADSHYAGRPHRAVVEGRKKPXNTILCQKSMEGRLEQLIRREKKNLKP 587
C LC V TS+ + H G+ H+A + N I KS E+ ++
Sbjct: 255 CALCQVSATSEGALNEHLEGKRHKAKL-AHCGASNAIKDGKS--SLKEKTANKDDAGPSD 311
Query: 586 IXXXXXXXXXXEAKPI---SPELYCEICKTSMTCSEQMTMHLNGKRHLTKEKQHILKMMK 416
+ S L+C+ CK + M HL GK+H K + +
Sbjct: 312 APKKICIQVDGAMHEVVQKSNYLWCDRCKVRCDNNVTMADHLRGKKHSGLNK--VWTSIN 369
Query: 415 CGSENEKKQXAPVKQEKTEKSNDET 341
N+KK+ + E+T N+ T
Sbjct: 370 AVRMNKKKEQSAATWEETVNENERT 394
>06_01_0817 - 6185881-6187074
Length = 397
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 1 SHXAPPASHGCIPPFKVLHQGHLPSCR-FRCPNRNRLRPP 117
S+ PP++ C PP H GH P CR P + PP
Sbjct: 6 SNPPPPSATSCPPPGSAAHAGHAPLCRSCGAPTTTPVPPP 45
>09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351
Length = 415
Score = 33.5 bits (73), Expect = 0.20
Identities = 28/104 (26%), Positives = 37/104 (35%)
Frame = -3
Query: 766 CELCDVHITSKSHADSHYAGRPHRAVVEGRKKPXNTILCQKSMEGRLEQLIRREKKNLKP 587
C LC V +TS H A HR+ N + + E EKK KP
Sbjct: 315 CSLCKVTMTSPRALVEHRASLLHRS---------NLAPLRSGNKATTEAAQPAEKKTEKP 365
Query: 586 IXXXXXXXXXXEAKPISPELYCEICKTSMTCSEQMTMHLNGKRH 455
+ YC+IC+ + + M HL GKRH
Sbjct: 366 EASEWNSSAHHHQNRM---YYCDICEVRCSSEKMMASHLAGKRH 406
Score = 31.9 bits (69), Expect = 0.61
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -3
Query: 769 YCELCDVHITSKSHADSHYAGRPHR 695
YC++C+V +S+ SH AG+ HR
Sbjct: 383 YCDICEVRCSSEKMMASHLAGKRHR 407
>08_01_1026 - 10366534-10368021,10368505-10368525
Length = 502
Score = 32.7 bits (71), Expect = 0.35
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 547 KPISPELYCEICKTSMTCSEQMTMHLNGKRHLTK 446
KP + +L C +C + T + M HLNGK H K
Sbjct: 45 KPKAADLTCAVCGITSTGEKAMQDHLNGKSHKKK 78
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -3
Query: 772 LYCELCDVHITSKSHADSHYAGRPHRAVVEGRKK 671
+ C++C+V S + SH AGR H+++ K
Sbjct: 240 IICDVCNVKAPSVTVMRSHLAGRKHKSMAAATAK 273
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -3
Query: 547 KPISPELYCEICKTSMTCSEQMTMHLNGKRHLTK 446
K I L C C T M +HL GK+H K
Sbjct: 334 KQIGEFLGCASCNVMATSESGMRLHLAGKKHRNK 367
>10_08_0433 - 17889072-17889632,17890437-17890514,17892196-17892393
Length = 278
Score = 31.9 bits (69), Expect = 0.61
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 766 CELCDVHITSKSHADSHYAGRPH 698
C+LCDV + S+ + HYAG+ H
Sbjct: 230 CQLCDVLLASELNVAQHYAGKQH 252
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -3
Query: 772 LYCELCDVHITSKSHADSHYAGRPHRAVVEGRKKPXNTILCQ 647
LYC +C+V ++ + H AGR HR V N + CQ
Sbjct: 191 LYCGVCNVKCMTRFNLREHEAGRKHRDKVASNAGEKN-VRCQ 231
>09_06_0031 -
20344594-20344611,20345578-20345813,20345899-20346018,
20346102-20346198,20348243-20348335
Length = 187
Score = 31.9 bits (69), Expect = 0.61
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -3
Query: 526 YCEICKTSMTCSEQMTMHLNGKRHLTKEKQHILKM-MKCGSENEKKQXAPVKQEKTEKSN 350
YCEI TS+ S MT+H+ GKR T + +L+ ++ G + ++Q+ E
Sbjct: 67 YCEIDGTSLCLSCDMTVHVGGKR--THGRYLLLRQRVEVGDKPGHMDDVAMQQKDPENRT 124
Query: 349 DETAA 335
D+ A
Sbjct: 125 DQKKA 129
>03_06_0561 +
34728428-34728439,34728529-34728615,34728729-34728750,
34728843-34728925,34729139-34729171,34729468-34729546,
34729642-34729694,34729931-34729991,34730168-34730250,
34730418-34730513
Length = 202
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = -3
Query: 526 YCEICKTSMTCSEQMTMHLNGKRHLTKEKQHILKMMKCGSENEKKQXAPVKQEKTEKSND 347
YC++C+ + S H+NGK+H + +++ + E +K+ +K+ K S
Sbjct: 83 YCKVCECVVKDSANYLDHINGKKH-QRALGMSMRVERASLEQVQKRFESLKKRKDPGSFS 141
Query: 346 ETAAD 332
E D
Sbjct: 142 EQDLD 146
>04_03_1022 - 21778315-21779007
Length = 230
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/48 (22%), Positives = 26/48 (54%)
Frame = -3
Query: 376 KQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDE 233
+ + ++ +ETAA ++V + + + + +D ++V +ITDE
Sbjct: 166 RARRRREAEEETAAAAVVVDDVEVSSSHHVHAVAHVVDGQNVVDITDE 213
>10_05_0043 +
8503979-8504407,8506484-8506624,8506865-8506975,
8507746-8508330
Length = 421
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 547 KPISPELYCEICKTSMTCSEQMTMHLNGKRH 455
K + P L CE+CK E + +H GK+H
Sbjct: 273 KVVQP-LTCEVCKIQCDTPEVLRIHKTGKKH 302
>01_06_0847 +
32411521-32411619,32411737-32411851,32412292-32412375,
32412430-32413478,32414690-32416371,32416477-32416586,
32417634-32418430,32418839-32418951,32419147-32419194,
32419425-32419652,32419732-32419829,32419967-32420019
Length = 1491
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = -3
Query: 469 NGKRHLTKEKQHILKM--MKCGSENEKKQXAPVKQEKTEKSNDETAADCIIVANKAIDVD 296
N ++ L ++ +++++ K E + + K E+ +K N++ + A+D
Sbjct: 268 NSEKSLAEKNKNLIETERKKLTEEKSRAECLFAKLEEQKKLNEDLRVRIEVERKNAVDQK 327
Query: 295 TAIDLLTQAIDEE 257
ID L+Q ++EE
Sbjct: 328 NHIDHLSQKLEEE 340
>06_03_0082 + 16363742-16364632
Length = 296
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 118 KEGEDDYDWGNGSGNWEDAPGEEL*KGGCNHGMPE 14
+E E++ DWG G+G ++ EEL GG G E
Sbjct: 200 EEEEEEEDWG-GAGGGDECDSEELPDGGGGLGEDE 233
>11_04_0132 - 13804018-13804114,13804196-13804274,13804709-13804880
Length = 115
Score = 27.9 bits (59), Expect = 10.0
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = -3
Query: 502 MTCSEQMTMHLNGKRHLTKEKQHILKMMKCGSENEKKQXAPVKQEKTEKSNDETA 338
M S +T+ + KR TK K L + C E AP+ E +K ND A
Sbjct: 1 MATSAPLTLKMRRKRRNTKRKD--LSIAPCMLEECSIGQAPIISEDEKKGNDNGA 53
>09_04_0159 + 15213752-15214028,15214158-15214399
Length = 172
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 476 HSHLLRASHGSLAYFTIQL 532
H HLLRA+ GSLA+ T L
Sbjct: 86 HHHLLRAASGSLAWMTAAL 104
>08_02_1617 - 28265252-28265354,28266546-28266608,28266943-28267151
Length = 124
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -3
Query: 775 ELYCELCDVHITSKSHADSHYAGRPHRAVVEGRKKP 668
+ YC CD + S+S + HY + H+ ++ P
Sbjct: 63 QFYCLHCDRYFASESVKEEHYRSKRHKKRIKQMSGP 98
>07_02_0028 +
11964941-11964991,11965259-11966101,11966249-11966560,
11966640-11967073,11967500-11967941
Length = 693
Score = 27.9 bits (59), Expect = 10.0
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 316 NKAIDVDTAID-LLTQAIDEEDVAEITDEGSXTAEVSKT 203
+K ID A+D + QA+DEED+ E D+ AE+S T
Sbjct: 488 DKPIDDLPALDPTIEQALDEEDIGEDVDQA--VAEMSDT 524
>01_06_0282 -
28160321-28160417,28160585-28160653,28161090-28161145,
28161650-28161741,28162314-28162398,28162512-28162628,
28162766-28162798,28163109-28163199,28163908-28163967,
28164115-28164180,28165238-28165430,28165665-28165821
Length = 371
Score = 27.9 bits (59), Expect = 10.0
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 88 CPNRNRLRPPSVPQH 132
CP+ + RPPS+PQH
Sbjct: 32 CPSSRQQRPPSLPQH 46
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,260,722
Number of Sequences: 37544
Number of extensions: 299888
Number of successful extensions: 1014
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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