Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_B01
(804 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41534-6|AAB47598.1| 375|Caenorhabditis elegans Hypothetical pr... 37 0.019
U13642-2|AAG00042.2| 430|Caenorhabditis elegans Abnormal growth... 34 0.14
AY052773-1|AAL14112.1| 430|Caenorhabditis elegans tRNA isopente... 34 0.14
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ... 32 0.55
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 31 0.97
U29488-7|AAA68771.1| 221|Caenorhabditis elegans Hypothetical pr... 30 1.7
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical... 29 3.9
AC024877-2|AAF60905.2| 608|Caenorhabditis elegans Hypothetical ... 29 3.9
Z32683-3|CAA83620.1| 124|Caenorhabditis elegans Hypothetical pr... 28 6.8
U21321-6|AAG00046.1| 206|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 28 9.0
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 28 9.0
>U41534-6|AAB47598.1| 375|Caenorhabditis elegans Hypothetical
protein C16A3.4 protein.
Length = 375
Score = 36.7 bits (81), Expect = 0.019
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -3
Query: 550 AKPISPELYCEICKTSMTCSEQMTMHLNGKRHLTKEKQHILKMMKCGSENEKK--QXAPV 377
A + P LYC+ C+ S+ MT H+ K+H EK+ I +K G + +K + P
Sbjct: 65 AASVEP-LYCKACRKSIKSENAMTDHVASKKHKENEKK-IEDDVKKGPKQPRKKPENLPK 122
Query: 376 KQEK-TEKSNDE 344
K E E NDE
Sbjct: 123 KPESLKEPENDE 134
>U13642-2|AAG00042.2| 430|Caenorhabditis elegans Abnormal growth
rate protein 1 protein.
Length = 430
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 529 LYCEICKTSMTCSEQMTMHLNGKRHLTKEKQ 437
L CEIC SMT + H++GK+H KQ
Sbjct: 392 LNCEICNISMTGKDNWQKHIDGKKHKHHAKQ 422
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -3
Query: 772 LYCELCDVHITSKSHADSHYAGRPHRAVVEGRK 674
L CE+C++ +T K + H G+ H+ + +K
Sbjct: 392 LNCEICNISMTGKDNWQKHIDGKKHKHHAKQKK 424
>AY052773-1|AAL14112.1| 430|Caenorhabditis elegans tRNA isopentenyl
transferase protein.
Length = 430
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 529 LYCEICKTSMTCSEQMTMHLNGKRHLTKEKQ 437
L CEIC SMT + H++GK+H KQ
Sbjct: 392 LNCEICNISMTGKDNWQKHIDGKKHKHHAKQ 422
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -3
Query: 772 LYCELCDVHITSKSHADSHYAGRPHRAVVEGRK 674
L CE+C++ +T K + H G+ H+ + +K
Sbjct: 392 LNCEICNISMTGKDNWQKHIDGKKHKHHAKQKK 424
>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
protein ZC123.3 protein.
Length = 1623
Score = 31.9 bits (69), Expect = 0.55
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 523 CEICKTSMTCSEQMTMHLNGKRHLTKEKQHI-LKMMKCGSENEKKQ 389
CE+C + E HLN RHL + K+ + ++ S++ +KQ
Sbjct: 534 CEMCSETFATKEAFLSHLNSARHLQQAKKQLENSLVDLNSQDVEKQ 579
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical
protein K10D2.3 protein.
Length = 1425
Score = 31.1 bits (67), Expect = 0.97
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3
Query: 769 YCELCDVHITSKSHADSHYAGRPH 698
YCE CD HI + HA +H H
Sbjct: 273 YCEKCDYHINTIGHAKAHLESSTH 296
>U29488-7|AAA68771.1| 221|Caenorhabditis elegans Hypothetical
protein C56C10.3 protein.
Length = 221
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = -3
Query: 499 TCSEQMTMH-LNGKRHLTKEKQHILKMMKC-GSENEKKQXAPVKQEKTEKSNDETAADCI 326
T +++M + LN KR+ K+ HI ++ G + E + A E TA+ +
Sbjct: 56 TKNKRMALQCLNRKRNFEKQLAHIDGVLSTIGYQREALENASTNAEVLNVMG--TASKAL 113
Query: 325 IVANKAIDVDTAIDLLTQAIDEEDVA 248
A+ +D+D DL+ ++++VA
Sbjct: 114 KAAHNNMDIDQVHDLMEDIAEQQEVA 139
>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
protein Y69A2AR.31 protein.
Length = 1219
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/32 (34%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = -1
Query: 771 CIVSCVMCISHQN-LMPTRIMLEDLIVQWWRV 679
C +S V C++HQN ++PT +E ++++ R+
Sbjct: 682 CKLSDVQCLAHQNSMIPTNPCIESAMIEYSRI 713
>AC024877-2|AAF60905.2| 608|Caenorhabditis elegans Hypothetical
protein Y95B8A.7 protein.
Length = 608
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = -3
Query: 784 KSXELYCELCDVHITSKSHADSHYAGRPHRAVVEGRKKPXNTILCQKSMEGRLEQLIRRE 605
K + +C+LCD + + + H GR HR V R+K T++ + Q R+
Sbjct: 171 KLVQFHCKLCDCKFSDPNAKEIHIKGRRHR--VSYRQKIDPTLVVDVKPSNKRSQEKRKN 228
Query: 604 K 602
+
Sbjct: 229 Q 229
>Z32683-3|CAA83620.1| 124|Caenorhabditis elegans Hypothetical
protein R07E5.5 protein.
Length = 124
Score = 28.3 bits (60), Expect = 6.8
Identities = 22/93 (23%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Frame = -3
Query: 523 CEICKTSMTCSEQMTMHLNG------KRHLT--KEKQHILKMMKCGSENEKKQXAPVKQE 368
C++C+ + SE++ H ++ L+ KEK I K ++C E K+ QE
Sbjct: 30 CDLCEKNFKTSEELVEHKKNYPRADVEKALSVYKEKDTIYKCLQCSGEFRLKEDFDYHQE 89
Query: 367 KTEKSND-ETAADCIIVANK--AIDVDTAIDLL 278
++ + ++A+ ANK D+D++ +++
Sbjct: 90 LHKRLGELKSASSNKSEANKDDESDIDSSFEII 122
>U21321-6|AAG00046.1| 206|Caenorhabditis elegans Hypothetical
protein ZK177.3 protein.
Length = 206
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 796 EIPLKSXELYCELCDVHITSKSHADSHYAG 707
++ K CELCD T K+ SHY G
Sbjct: 29 DLECKHKYFRCELCDFKSTQKTGLTSHYHG 58
>Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical
protein W03G11.1b protein.
Length = 279
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 118 KEGEDDYDWGNGSGNWEDAPGEEL*KGGCNHGMP 17
+ G D +GS APG+E +GGC+H P
Sbjct: 239 ENGPDGAPGKSGSDGQPGAPGKEGSRGGCDHCPP 272
>Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical
protein W03G11.1a protein.
Length = 332
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 118 KEGEDDYDWGNGSGNWEDAPGEEL*KGGCNHGMP 17
+ G D +GS APG+E +GGC+H P
Sbjct: 292 ENGPDGAPGKSGSDGQPGAPGKEGSRGGCDHCPP 325
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = -3
Query: 466 GKRHLTKEKQHILKMMKCGSENEKKQXAPVKQEKTEKSNDETAADCIIVANKAIDVDT 293
G++ +K+K+ + KC ++K K E ++++D AA NK +D T
Sbjct: 2247 GEKGKSKDKEKDGEKEKCKDASKKDDVTSEKNELEKRASDAAAATNAPETNKDMDTST 2304
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/88 (22%), Positives = 37/88 (42%)
Frame = -3
Query: 469 NGKRHLTKEKQHILKMMKCGSENEKKQXAPVKQEKTEKSNDETAADCIIVANKAIDVDTA 290
N +R KE++HI + + +E+ Q K ++ E++ +E A A DT
Sbjct: 381 NLERATQKEREHIERHREAQERHERLQALEAKDKEDERAREEDKAKAREEAKS--KKDTK 438
Query: 289 IDLLTQAIDEEDVAEITDEGSXTAEVSK 206
+ ID + + I + + E K
Sbjct: 439 AEKSKVTIDPKQIVNIPGKVYASQEAKK 466
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,344,990
Number of Sequences: 27780
Number of extensions: 250488
Number of successful extensions: 1001
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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