Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_A24
         (751 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   0.57 
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         25   0.76 
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    23   4.0  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   5.3  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   5.3  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   9.3  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   9.3  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 25.4 bits (53), Expect = 0.57
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 129 ILFIWLLALCLCV 91
           I+ IWLLALCL V
Sbjct: 175 IIVIWLLALCLAV 187


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -3

Query: 254 QKVKEEEVEA*TS*YPNH*DLSPTVNNYVMCPIVCLSAKRLKFYLSGC-LRCV 99
           ++++EE +E  T    ++  L P  +  V C ++   +K L    S C +RC+
Sbjct: 34  RQIEEENIEPDTELMDSNEPLLPLRHRRVTCDVLSWQSKWLSINHSACAIRCL 86


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -2

Query: 129 ILFIWLLALCLCVSKPDI*VKFKQLPVLSYQSFCVFQR 16
           +LF  +LAL    ++ DI    K  P +  Q  C+  R
Sbjct: 6   LLFFTILALINVKAQDDISKFLKDRPYVQKQLHCILDR 43


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -1

Query: 595 LTTPTKILLRGFAKTTMNASLVLKMKNSIWN 503
           +  P   LL GF ++T + +  ++  N  WN
Sbjct: 18  MLAPINALLLGFVQSTPDNNKTVREFNVYWN 48


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = -2

Query: 459 PSQRPQRQIRQAHTKEGF---QIRKQIRQAPEEGRRIQLP*PIEGREKEGIHLGRGRQ 295
           P   P++Q +QA   +G     + +Q + AP+      LP P+    +      RGRQ
Sbjct: 219 PGMHPRQQ-QQAQQHQGVVTSPLSQQQQAAPQGAASANLPSPLYPWMRSQFERKRGRQ 275


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = +1

Query: 367 AFFWSLANL--FSYLETFFSVGLTNLPLRSLTWEFRSE 474
           +F + +A L  F+ +  F  VG   +PL    WE  +E
Sbjct: 314 SFGYCIATLLEFAGVHYFTKVGSGEIPLEEEEWENENE 351


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -3

Query: 350 RNQLKVVKKKEFTLEEEDKEKKPDWSKGKP-GDQKVKEEE 234
           RNQ K V  + F ++ +    +P  S G+P G ++ +E E
Sbjct: 446 RNQRKNVLDRLFRMDRDAVYLQPGMSFGEPLGLRRPQERE 485


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,052
Number of Sequences: 438
Number of extensions: 2771
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)