Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_A22
         (300 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2AB74 Cluster: Bitter taste receptor; n=1; Xenopus tro...    35   0.41 
UniRef50_Q9KGI6 Cluster: BH0075 protein; n=1; Bacillus haloduran...    31   5.1  
UniRef50_Q9LBG3 Cluster: PAaA; n=1; Streptococcus criceti|Rep: P...    31   6.7  
UniRef50_A2RG65 Cluster: Putative membrane protein; n=15; Strept...    31   6.7  
UniRef50_Q4UD18 Cluster: Putative uncharacterized protein; n=2; ...    31   6.7  
UniRef50_Q8XSD6 Cluster: Probable hemagglutinin-related protein;...    30   8.9  

>UniRef50_Q2AB74 Cluster: Bitter taste receptor; n=1; Xenopus
           tropicalis|Rep: Bitter taste receptor - Xenopus
           tropicalis (Western clawed frog) (Silurana tropicalis)
          Length = 300

 Score = 34.7 bits (76), Expect = 0.41
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
 Frame = +3

Query: 57  IKFIIISYFCGYIKFHIFFSFNSKWILGWL*QLS*YYVIVII-MLPLLEFLKSFI-SLQA 230
           I F     +C +  F +   + S+W+  WL  L  Y+V++ I   P +  L+S I S+  
Sbjct: 68  IPFSAFGIYCIFYVFELSLDYFSRWVAMWLSVL--YFVMITISKQPFMLSLRSKIPSITR 125

Query: 231 S*IWQSMXYNYYYKLT 278
           S +W S+  +++  LT
Sbjct: 126 SMLWVSILLSFFPALT 141


>UniRef50_Q9KGI6 Cluster: BH0075 protein; n=1; Bacillus
           halodurans|Rep: BH0075 protein - Bacillus halodurans
          Length = 198

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 21/65 (32%), Positives = 33/65 (50%)
 Frame = +3

Query: 24  QIHYMXFEFGNIKFIIISYFCGYIKFHIFFSFNSKWILGWL*QLS*YYVIVIIMLPLLEF 203
           Q++    E G I+F++  Y  G    HIFF    KW+L  L +L    +I+  +L +  F
Sbjct: 90  QVYQKLLERG-IQFVLALYRFGRKMIHIFFVSPIKWLLNLLYRLC--MMIISAVLSIFYF 146

Query: 204 LKSFI 218
           L + I
Sbjct: 147 LLNLI 151


>UniRef50_Q9LBG3 Cluster: PAaA; n=1; Streptococcus criceti|Rep: PAaA
           - Streptococcus criceti
          Length = 1653

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = -2

Query: 152 LSQPTQNPFTVKTEKNMKFNITT--KITNYDKFYVSEFKL 39
           L  P   PF  + EKN    IT+  K+ N D+FY    KL
Sbjct: 668 LPSPESQPFIFEQEKNATLEITSGDKVYNADEFYAEADKL 707


>UniRef50_A2RG65 Cluster: Putative membrane protein; n=15;
           Streptococcus|Rep: Putative membrane protein -
           Streptococcus pyogenes serotype M5 (strain Manfredo)
          Length = 138

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +3

Query: 63  FIIISYFCGYIKFHIFFSFNSKW--ILGWL*QLS*YYV 170
           + +I ++ G++K  I F  ++KW   +GW+  +  YYV
Sbjct: 45  YSLIPFYAGFVKHKITFGEDNKWFYFIGWVIAIYYYYV 82


>UniRef50_Q4UD18 Cluster: Putative uncharacterized protein; n=2;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria annulata
          Length = 448

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -2

Query: 146 QPTQNPFTVKTEKNMKFNITTKITNYDKFYVSEFKLHIMN 27
           QP++ P +   +   K+N+  K+T  D+F  + FK  ++N
Sbjct: 26  QPSKIPLSSNLQNRSKYNMINKLTLNDEFSTNIFKQQVIN 65


>UniRef50_Q8XSD6 Cluster: Probable hemagglutinin-related protein; n=3;
            Burkholderiaceae|Rep: Probable hemagglutinin-related
            protein - Ralstonia solanacearum (Pseudomonas
            solanacearum)
          Length = 3552

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = -2

Query: 152  LSQPTQNPFTVKTEKNMKFNITT--KITNYDKFYVSEFKLHIMNL 24
            +S PT   F+ +T     + I T  ++T+Y KF  S++ L  +NL
Sbjct: 1605 ISLPTSGLFSFRTAPGQPYLIATDPRLTSYTKFISSDYMLSALNL 1649


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 260,078,344
Number of Sequences: 1657284
Number of extensions: 3861108
Number of successful extensions: 6725
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6725
length of database: 575,637,011
effective HSP length: 76
effective length of database: 449,683,427
effective search space used: 10342718821
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)