BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_A17
(592 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U20980-1|AAA76737.1| 559|Homo sapiens chromatin assembly factor... 35 0.19
BC021218-1|AAH21218.1| 559|Homo sapiens chromatin assembly fact... 35 0.19
AP001725-3|BAA95549.1| 559|Homo sapiens chromatin assembly fact... 35 0.19
AP000694-1|BAA89426.1| 559|Homo sapiens chromatin assembly fact... 35 0.19
BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein. 34 0.33
AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein p... 34 0.33
AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein. 34 0.33
BC008648-1|AAH08648.1| 358|Homo sapiens Unknown (protein for IM... 33 0.57
X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein. 33 0.76
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein. 33 0.76
M96980-1|AAA59897.1| 725|Homo sapiens myelin transcription fact... 31 2.3
BC062313-1|AAH62313.1| 591|Homo sapiens MYT1 protein protein. 31 2.3
BC053638-1|AAH53638.1| 846|Homo sapiens MYT1 protein protein. 31 2.3
AL121581-3|CAC17005.1| 1121|Homo sapiens myelin transcription fa... 31 2.3
AB028973-1|BAA83002.1| 829|Homo sapiens KIAA1050 protein protein. 31 2.3
AB020642-1|BAA74858.2| 1167|Homo sapiens KIAA0835 protein protein. 31 2.3
X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subun... 31 4.0
BC069444-1|AAH69444.1| 639|Homo sapiens CD2-associated protein ... 30 7.0
AL358178-2|CAI16839.1| 639|Homo sapiens CD2-associated protein ... 30 7.0
AL355353-1|CAH73238.1| 639|Homo sapiens CD2-associated protein ... 30 7.0
AF164377-1|AAF80495.1| 639|Homo sapiens CD2AP homolog protein. 30 7.0
AF146277-1|AAD34595.1| 639|Homo sapiens adapter protein CMS pro... 30 7.0
L05425-1|AAC37588.1| 731|Homo sapiens nucleolar GTPase protein. 29 9.3
BC009250-1|AAH09250.1| 731|Homo sapiens guanine nucleotide bind... 29 9.3
BC000107-1|AAH00107.1| 731|Homo sapiens guanine nucleotide bind... 29 9.3
AL513220-1|CAI15784.1| 731|Homo sapiens guanine nucleotide bind... 29 9.3
AL034379-1|CAI20546.1| 731|Homo sapiens guanine nucleotide bind... 29 9.3
>U20980-1|AAA76737.1| 559|Homo sapiens chromatin assembly factor-I
p60 subunit protein.
Length = 559
Score = 35.1 bits (77), Expect = 0.19
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -1
Query: 592 TWSNNGRILVASSTDGXCSIITF 524
+WS++G L SSTDG CS +TF
Sbjct: 353 SWSSDGAFLAISSTDGYCSFVTF 375
>BC021218-1|AAH21218.1| 559|Homo sapiens chromatin assembly factor
1, subunit B (p60) protein.
Length = 559
Score = 35.1 bits (77), Expect = 0.19
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -1
Query: 592 TWSNNGRILVASSTDGXCSIITF 524
+WS++G L SSTDG CS +TF
Sbjct: 353 SWSSDGAFLAISSTDGYCSFVTF 375
>AP001725-3|BAA95549.1| 559|Homo sapiens chromatin assembly
factor-I p60 subunit protein.
Length = 559
Score = 35.1 bits (77), Expect = 0.19
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -1
Query: 592 TWSNNGRILVASSTDGXCSIITF 524
+WS++G L SSTDG CS +TF
Sbjct: 353 SWSSDGAFLAISSTDGYCSFVTF 375
>AP000694-1|BAA89426.1| 559|Homo sapiens chromatin assembly factor
1, subunit B (p60) protein.
Length = 559
Score = 35.1 bits (77), Expect = 0.19
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -1
Query: 592 TWSNNGRILVASSTDGXCSIITF 524
+WS++G L SSTDG CS +TF
Sbjct: 353 SWSSDGAFLAISSTDGYCSFVTF 375
>BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein.
Length = 1026
Score = 34.3 bits (75), Expect = 0.33
Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 6/125 (4%)
Frame = -1
Query: 442 KPATQTEAPKPTKIDSFIK--FKAPEK--SP--KNLKTQTEIKTPVKIDFLEEVANPSWS 281
K + EA P K S +K K+PEK SP + KT + K+PVK + S
Sbjct: 701 KSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPE 760
Query: 280 DNSNNEIIKHRASEPMGSDVTVIEDSGDIKLVYEETEGVKSPPKTQQANKLETKSKQNTS 101
++ A P + D K E VKSP K + K + K+ +
Sbjct: 761 KAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEI 820
Query: 100 PKDNQ 86
PK +
Sbjct: 821 PKKEE 825
Score = 33.5 bits (73), Expect = 0.57
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 3/141 (2%)
Frame = -1
Query: 445 EKPATQTEAPKPTKIDSFIKFKAPEKSPKNLKTQT--EIKTPVKIDFLEEVANPSWSDNS 272
E+ + EA P K ++ K A KSP+ K+ T E K+P K E+ +P +
Sbjct: 610 EEAKSPAEAKSPVKEEA--KSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKAKSPEKEEAK 667
Query: 271 NNEIIKHRASEPMGSDVTVIEDS-GDIKLVYEETEGVKSPPKTQQANKLETKSKQNTSPK 95
+ E +A P+ ++ E + +K + E KSP K + + + KS K
Sbjct: 668 SPE----KAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAK 723
Query: 94 DNQFFRQAQGDRCQTANSGNS 32
+ + + +T S
Sbjct: 724 SPEKAKSPVKEEAKTPEKAKS 744
Score = 31.9 bits (69), Expect = 1.7
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Frame = -1
Query: 442 KPATQTEAPKPTKIDSFIKF--KAPEKSPKNLKTQTE----IKTPVKIDFLEEVANPSWS 281
K + EA P K S +K K+PEK+ +K + + K+PVK EE +P +
Sbjct: 659 KSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVK----EEAKSPEKA 714
Query: 280 DNSNNEIIK--HRASEPMGSDVTVIEDS-GDIKLVYEETEGVKSPPKTQQANKLETKSKQ 110
+ E K +A P+ + E + +K + E KSP K A L+ KS +
Sbjct: 715 KSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEK---AKTLDVKSPE 771
Query: 109 NTSP 98
+P
Sbjct: 772 AKTP 775
Score = 30.7 bits (66), Expect = 4.0
Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 4/134 (2%)
Frame = -1
Query: 448 DEKPATQTEAPKPTKIDSFIKFKAPEKSPKNLKTQTEIKTPVKIDFLEEVANPSWSDNSN 269
+EK E PK +K+++ K E K E + P K++ E+ ++ +
Sbjct: 881 EEKKEPAVEKPKESKVEA----KKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAK 936
Query: 268 NEIIKHRASEPM--GSDVTVIEDSGDIKLVYEETEGVKSPPKTQQANKLETK--SKQNTS 101
E +A EP + D K E+ + + PKT+ K + K SK+ +
Sbjct: 937 KEPDDAKAKEPSKPAEKKEAAPEKKDTK--EEKAKKPEEKPKTEAKAKEDDKTLSKEPSK 994
Query: 100 PKDNQFFRQAQGDR 59
PK + + + D+
Sbjct: 995 PKAEKAEKSSSTDQ 1008
Score = 30.3 bits (65), Expect = 5.3
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 QDEKPATQTEAPKPTKIDSFIKFKAPEKSPKNLKTQT-EIKTPVKIDFLEEVANPSWS-D 278
++ K + ++P + S K K+PEK+ K L ++ E KTP K EE +P+
Sbjct: 734 EEAKTPEKAKSPVKEEAKSPEKAKSPEKA-KTLDVKSPEAKTPAK----EEARSPADKFP 788
Query: 277 NSNNEIIKHRASEPMGSDVTVIEDSGDIKLVYEETEGVKSPPKTQQANKLETKSKQ 110
+K P + + ED+ + + E VKSP K ++ + E K K+
Sbjct: 789 EKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQ-EVKVKE 843
>AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein
protein.
Length = 1026
Score = 34.3 bits (75), Expect = 0.33
Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 6/125 (4%)
Frame = -1
Query: 442 KPATQTEAPKPTKIDSFIK--FKAPEK--SP--KNLKTQTEIKTPVKIDFLEEVANPSWS 281
K + EA P K S +K K+PEK SP + KT + K+PVK + S
Sbjct: 701 KSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPE 760
Query: 280 DNSNNEIIKHRASEPMGSDVTVIEDSGDIKLVYEETEGVKSPPKTQQANKLETKSKQNTS 101
++ A P + D K E VKSP K + K + K+ +
Sbjct: 761 KAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEI 820
Query: 100 PKDNQ 86
PK +
Sbjct: 821 PKKEE 825
Score = 33.5 bits (73), Expect = 0.57
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 3/141 (2%)
Frame = -1
Query: 445 EKPATQTEAPKPTKIDSFIKFKAPEKSPKNLKTQT--EIKTPVKIDFLEEVANPSWSDNS 272
E+ + EA P K ++ K A KSP+ K+ T E K+P K E+ +P +
Sbjct: 610 EEAKSPAEAKSPVKEEA--KSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKAKSPEKEEAK 667
Query: 271 NNEIIKHRASEPMGSDVTVIEDS-GDIKLVYEETEGVKSPPKTQQANKLETKSKQNTSPK 95
+ E +A P+ ++ E + +K + E KSP K + + + KS K
Sbjct: 668 SPE----KAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAK 723
Query: 94 DNQFFRQAQGDRCQTANSGNS 32
+ + + +T S
Sbjct: 724 SPEKAKSPVKEEAKTPEKAKS 744
Score = 31.9 bits (69), Expect = 1.7
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Frame = -1
Query: 442 KPATQTEAPKPTKIDSFIKF--KAPEKSPKNLKTQTE----IKTPVKIDFLEEVANPSWS 281
K + EA P K S +K K+PEK+ +K + + K+PVK EE +P +
Sbjct: 659 KSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVK----EEAKSPEKA 714
Query: 280 DNSNNEIIK--HRASEPMGSDVTVIEDS-GDIKLVYEETEGVKSPPKTQQANKLETKSKQ 110
+ E K +A P+ + E + +K + E KSP K A L+ KS +
Sbjct: 715 KSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEK---AKTLDVKSPE 771
Query: 109 NTSP 98
+P
Sbjct: 772 AKTP 775
Score = 30.7 bits (66), Expect = 4.0
Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 4/134 (2%)
Frame = -1
Query: 448 DEKPATQTEAPKPTKIDSFIKFKAPEKSPKNLKTQTEIKTPVKIDFLEEVANPSWSDNSN 269
+EK E PK +K+++ K E K E + P K++ E+ ++ +
Sbjct: 881 EEKKEPAVEKPKESKVEA----KKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAK 936
Query: 268 NEIIKHRASEPM--GSDVTVIEDSGDIKLVYEETEGVKSPPKTQQANKLETK--SKQNTS 101
E +A EP + D K E+ + + PKT+ K + K SK+ +
Sbjct: 937 KEPDDAKAKEPSKPAEKKEAAPEKKDTK--EEKAKKPEEKPKTEAKAKEDDKTLSKEPSK 994
Query: 100 PKDNQFFRQAQGDR 59
PK + + + D+
Sbjct: 995 PKAEKAEKSSSTDQ 1008
Score = 30.3 bits (65), Expect = 5.3
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 QDEKPATQTEAPKPTKIDSFIKFKAPEKSPKNLKTQT-EIKTPVKIDFLEEVANPSWS-D 278
++ K + ++P + S K K+PEK+ K L ++ E KTP K EE +P+
Sbjct: 734 EEAKTPEKAKSPVKEEAKSPEKAKSPEKA-KTLDVKSPEAKTPAK----EEARSPADKFP 788
Query: 277 NSNNEIIKHRASEPMGSDVTVIEDSGDIKLVYEETEGVKSPPKTQQANKLETKSKQ 110
+K P + + ED+ + + E VKSP K ++ + E K K+
Sbjct: 789 EKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQ-EVKVKE 843
>AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein.
Length = 1034
Score = 34.3 bits (75), Expect = 0.33
Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 6/125 (4%)
Frame = -1
Query: 442 KPATQTEAPKPTKIDSFIK--FKAPEK--SP--KNLKTQTEIKTPVKIDFLEEVANPSWS 281
K + EA P K S +K K+PEK SP + KT + K+PVK + S
Sbjct: 709 KSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPE 768
Query: 280 DNSNNEIIKHRASEPMGSDVTVIEDSGDIKLVYEETEGVKSPPKTQQANKLETKSKQNTS 101
++ A P + D K E VKSP K + K + K+ +
Sbjct: 769 KAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEI 828
Query: 100 PKDNQ 86
PK +
Sbjct: 829 PKKEE 833
Score = 33.5 bits (73), Expect = 0.57
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 3/141 (2%)
Frame = -1
Query: 445 EKPATQTEAPKPTKIDSFIKFKAPEKSPKNLKTQT--EIKTPVKIDFLEEVANPSWSDNS 272
E+ + EA P K ++ K A KSP+ K+ T E K+P K E+ +P +
Sbjct: 618 EEAKSPAEAKSPVKEEA--KSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKAKSPEKEEAK 675
Query: 271 NNEIIKHRASEPMGSDVTVIEDS-GDIKLVYEETEGVKSPPKTQQANKLETKSKQNTSPK 95
+ E +A P+ ++ E + +K + E KSP K + + + KS K
Sbjct: 676 SPE----KAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAK 731
Query: 94 DNQFFRQAQGDRCQTANSGNS 32
+ + + +T S
Sbjct: 732 SPEKAKSPVKEEAKTPEKAKS 752
Score = 31.9 bits (69), Expect = 1.7
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Frame = -1
Query: 442 KPATQTEAPKPTKIDSFIKF--KAPEKSPKNLKTQTE----IKTPVKIDFLEEVANPSWS 281
K + EA P K S +K K+PEK+ +K + + K+PVK EE +P +
Sbjct: 667 KSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVK----EEAKSPEKA 722
Query: 280 DNSNNEIIK--HRASEPMGSDVTVIEDS-GDIKLVYEETEGVKSPPKTQQANKLETKSKQ 110
+ E K +A P+ + E + +K + E KSP K A L+ KS +
Sbjct: 723 KSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEK---AKTLDVKSPE 779
Query: 109 NTSP 98
+P
Sbjct: 780 AKTP 783
Score = 30.7 bits (66), Expect = 4.0
Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 4/134 (2%)
Frame = -1
Query: 448 DEKPATQTEAPKPTKIDSFIKFKAPEKSPKNLKTQTEIKTPVKIDFLEEVANPSWSDNSN 269
+EK E PK +K+++ K E K E + P K++ E+ ++ +
Sbjct: 889 EEKKEPAVEKPKESKVEA----KKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAK 944
Query: 268 NEIIKHRASEPM--GSDVTVIEDSGDIKLVYEETEGVKSPPKTQQANKLETK--SKQNTS 101
E +A EP + D K E+ + + PKT+ K + K SK+ +
Sbjct: 945 KEPDDAKAKEPSKPAEKKEAAPEKKDTK--EEKAKKPEEKPKTEAKAKEDDKTLSKEPSK 1002
Query: 100 PKDNQFFRQAQGDR 59
PK + + + D+
Sbjct: 1003 PKAEKAEKSSSTDQ 1016
Score = 30.3 bits (65), Expect = 5.3
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 QDEKPATQTEAPKPTKIDSFIKFKAPEKSPKNLKTQT-EIKTPVKIDFLEEVANPSWS-D 278
++ K + ++P + S K K+PEK+ K L ++ E KTP K EE +P+
Sbjct: 742 EEAKTPEKAKSPVKEEAKSPEKAKSPEKA-KTLDVKSPEAKTPAK----EEARSPADKFP 796
Query: 277 NSNNEIIKHRASEPMGSDVTVIEDSGDIKLVYEETEGVKSPPKTQQANKLETKSKQ 110
+K P + + ED+ + + E VKSP K ++ + E K K+
Sbjct: 797 EKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQ-EVKVKE 851
>BC008648-1|AAH08648.1| 358|Homo sapiens Unknown (protein for
IMAGE:3866238) protein.
Length = 358
Score = 33.5 bits (73), Expect = 0.57
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 3/141 (2%)
Frame = -1
Query: 445 EKPATQTEAPKPTKIDSFIKFKAPEKSPKNLKTQT--EIKTPVKIDFLEEVANPSWSDNS 272
E+ + EA P K ++ K A KSP+ K+ T E K+P K E+ +P +
Sbjct: 5 EEAKSPAEAKSPVKEEA--KSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKAKSPEKEEAK 62
Query: 271 NNEIIKHRASEPMGSDVTVIEDS-GDIKLVYEETEGVKSPPKTQQANKLETKSKQNTSPK 95
+ E +A P+ ++ E + +K + E KSP K + + + KS K
Sbjct: 63 SPE----KAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAK 118
Query: 94 DNQFFRQAQGDRCQTANSGNS 32
+ + + +T S
Sbjct: 119 SPEKAKSPVKEEAKTPEKAKS 139
Score = 30.7 bits (66), Expect = 4.0
Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 4/134 (2%)
Frame = -1
Query: 448 DEKPATQTEAPKPTKIDSFIKFKAPEKSPKNLKTQTEIKTPVKIDFLEEVANPSWSDNSN 269
+EK E PK +K+++ K E K E + P K++ E+ ++ +
Sbjct: 213 EEKKEPAVEKPKESKVEA----KKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAK 268
Query: 268 NEIIKHRASEPM--GSDVTVIEDSGDIKLVYEETEGVKSPPKTQQANKLETK--SKQNTS 101
E +A EP + D K E+ + + PKT+ K + K SK+ +
Sbjct: 269 KEPDDAKAKEPSKPAEKKEAAPEKKDTK--EEKAKKPEEKPKTEAKAKEDDKTLSKEPSK 326
Query: 100 PKDNQFFRQAQGDR 59
PK + + + D+
Sbjct: 327 PKAEKAEKSSSTDQ 340
>X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.
Length = 7962
Score = 33.1 bits (72), Expect = 0.76
Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Frame = -1
Query: 454 TQDEK---PATQTEAPKPTKIDSFIKFKAPEKSPKNLKTQTEIKTPVKI-DFLEEVANPS 287
TQ+EK T+ EAP ++ K PE+ LK + E + P K+ +F + V
Sbjct: 6309 TQEEKVLVAVTKKEAPPKARVPEEPKRAVPEEKVLKLKPKREEEPPAKVTEFRKRVVK-- 6366
Query: 286 WSDNSNNEIIKHRASEPMGSDVTVIEDSGDIKLVYEETEGVKSPPKTQQANKLETKSKQN 107
+ + E K R +P+ +VT++E+ + EE V+ + ++ + + K +
Sbjct: 6367 -EEKVSIEAPK-REPQPI-KEVTIMEEKERAYTLEEEAVSVQREEEYEEYEEYDYKEFEE 6423
Query: 106 TSPKD 92
P +
Sbjct: 6424 YEPTE 6428
>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
Length = 30000
Score = 33.1 bits (72), Expect = 0.76
Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Frame = -1
Query: 454 TQDEK---PATQTEAPKPTKIDSFIKFKAPEKSPKNLKTQTEIKTPVKI-DFLEEVANPS 287
TQ+EK T+ EAP ++ K PE+ LK + E + P K+ +F + V
Sbjct: 10571 TQEEKVLVAVTKKEAPPKARVPEEPKRAVPEEKVLKLKPKREEEPPAKVTEFRKRVVK-- 10628
Query: 286 WSDNSNNEIIKHRASEPMGSDVTVIEDSGDIKLVYEETEGVKSPPKTQQANKLETKSKQN 107
+ + E K R +P+ +VT++E+ + EE V+ + ++ + + K +
Sbjct: 10629 -EEKVSIEAPK-REPQPI-KEVTIMEEKERAYTLEEEAVSVQREEEYEEYEEYDYKEFEE 10685
Query: 106 TSPKD 92
P +
Sbjct: 10686 YEPTE 10690
>M96980-1|AAA59897.1| 725|Homo sapiens myelin transcription factor
1 protein.
Length = 725
Score = 31.5 bits (68), Expect = 2.3
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 169 GVKSPPKTQQANKLETKSKQNTSPKDNQFFRQAQGDR 59
GVKSP +Q+ + S TSP+ +Q RQ + DR
Sbjct: 298 GVKSPDASQRHSSTSAPSSSMTSPQSSQASRQDEWDR 334
>BC062313-1|AAH62313.1| 591|Homo sapiens MYT1 protein protein.
Length = 591
Score = 31.5 bits (68), Expect = 2.3
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 169 GVKSPPKTQQANKLETKSKQNTSPKDNQFFRQAQGDR 59
GVKSP +Q+ + S TSP+ +Q RQ + DR
Sbjct: 396 GVKSPDASQRHSSTSAPSSSMTSPQSSQASRQDEWDR 432
>BC053638-1|AAH53638.1| 846|Homo sapiens MYT1 protein protein.
Length = 846
Score = 31.5 bits (68), Expect = 2.3
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 169 GVKSPPKTQQANKLETKSKQNTSPKDNQFFRQAQGDR 59
GVKSP +Q+ + S TSP+ +Q RQ + DR
Sbjct: 419 GVKSPDASQRHSSTSAPSSSMTSPQSSQASRQDEWDR 455
>AL121581-3|CAC17005.1| 1121|Homo sapiens myelin transcription
factor 1 protein.
Length = 1121
Score = 31.5 bits (68), Expect = 2.3
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 169 GVKSPPKTQQANKLETKSKQNTSPKDNQFFRQAQGDR 59
GVKSP +Q+ + S TSP+ +Q RQ + DR
Sbjct: 694 GVKSPDASQRHSSTSAPSSSMTSPQSSQASRQDEWDR 730
>AB028973-1|BAA83002.1| 829|Homo sapiens KIAA1050 protein protein.
Length = 829
Score = 31.5 bits (68), Expect = 2.3
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 169 GVKSPPKTQQANKLETKSKQNTSPKDNQFFRQAQGDR 59
GVKSP +Q+ + S TSP+ +Q RQ + DR
Sbjct: 402 GVKSPDASQRHSSTSAPSSSMTSPQSSQASRQDEWDR 438
>AB020642-1|BAA74858.2| 1167|Homo sapiens KIAA0835 protein protein.
Length = 1167
Score = 31.5 bits (68), Expect = 2.3
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 169 GVKSPPKTQQANKLETKSKQNTSPKDNQFFRQAQGDR 59
GVKSP +Q+ + S TSP+ +Q RQ + DR
Sbjct: 740 GVKSPDASQRHSSTSAPSSSMTSPQSSQASRQDEWDR 776
>X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subunit
protein.
Length = 1020
Score = 30.7 bits (66), Expect = 4.0
Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 4/134 (2%)
Frame = -1
Query: 448 DEKPATQTEAPKPTKIDSFIKFKAPEKSPKNLKTQTEIKTPVKIDFLEEVANPSWSDNSN 269
+EK E PK +K+++ K E K E + P K++ E+ ++ +
Sbjct: 875 EEKKEPAVEKPKESKVEA----KKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAK 930
Query: 268 NEIIKHRASEPM--GSDVTVIEDSGDIKLVYEETEGVKSPPKTQQANKLETK--SKQNTS 101
E +A EP + D K E+ + + PKT+ K + K SK+ +
Sbjct: 931 KEPDDAKAKEPSKPAEKKEAAPEKKDTK--EEKAKKPEEKPKTEAKAKEDDKTLSKEPSK 988
Query: 100 PKDNQFFRQAQGDR 59
PK + + + D+
Sbjct: 989 PKAEKAEKSSSTDQ 1002
>BC069444-1|AAH69444.1| 639|Homo sapiens CD2-associated protein
protein.
Length = 639
Score = 29.9 bits (64), Expect = 7.0
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Frame = -1
Query: 373 EKSPKNLKTQTEIKTPVKIDFLEEVANPSWSDNSNNEIIKHRASEPMGSDVTVIEDSGDI 194
E P+N + + E+K ID EEV WS NN++ ++ +VT D G+
Sbjct: 118 EYIPQN-EDELELKVGDIIDINEEVEEGWWSGTLNNKLGLFPSNFVKELEVT---DDGET 173
Query: 193 KLVYEETEGVKSPPKT---QQANKLETKSKQNTSPK 95
+++E V + P + N ET S T PK
Sbjct: 174 HEAQDDSETVLAGPTSPIPSLGNVSETASGSVTQPK 209
>AL358178-2|CAI16839.1| 639|Homo sapiens CD2-associated protein
protein.
Length = 639
Score = 29.9 bits (64), Expect = 7.0
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Frame = -1
Query: 373 EKSPKNLKTQTEIKTPVKIDFLEEVANPSWSDNSNNEIIKHRASEPMGSDVTVIEDSGDI 194
E P+N + + E+K ID EEV WS NN++ ++ +VT D G+
Sbjct: 118 EYIPQN-EDELELKVGDIIDINEEVEEGWWSGTLNNKLGLFPSNFVKELEVT---DDGET 173
Query: 193 KLVYEETEGVKSPPKT---QQANKLETKSKQNTSPK 95
+++E V + P + N ET S T PK
Sbjct: 174 HEAQDDSETVLAGPTSPIPSLGNVSETASGSVTQPK 209
>AL355353-1|CAH73238.1| 639|Homo sapiens CD2-associated protein
protein.
Length = 639
Score = 29.9 bits (64), Expect = 7.0
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Frame = -1
Query: 373 EKSPKNLKTQTEIKTPVKIDFLEEVANPSWSDNSNNEIIKHRASEPMGSDVTVIEDSGDI 194
E P+N + + E+K ID EEV WS NN++ ++ +VT D G+
Sbjct: 118 EYIPQN-EDELELKVGDIIDINEEVEEGWWSGTLNNKLGLFPSNFVKELEVT---DDGET 173
Query: 193 KLVYEETEGVKSPPKT---QQANKLETKSKQNTSPK 95
+++E V + P + N ET S T PK
Sbjct: 174 HEAQDDSETVLAGPTSPIPSLGNVSETASGSVTQPK 209
>AF164377-1|AAF80495.1| 639|Homo sapiens CD2AP homolog protein.
Length = 639
Score = 29.9 bits (64), Expect = 7.0
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Frame = -1
Query: 373 EKSPKNLKTQTEIKTPVKIDFLEEVANPSWSDNSNNEIIKHRASEPMGSDVTVIEDSGDI 194
E P+N + + E+K ID EEV WS NN++ ++ +VT D G+
Sbjct: 118 EYIPQN-EDELELKVGDIIDINEEVEEGWWSGTLNNKLGLFPSNFVKELEVT---DDGET 173
Query: 193 KLVYEETEGVKSPPKT---QQANKLETKSKQNTSPK 95
+++E V + P + N ET S T PK
Sbjct: 174 HEAQDDSETVLAGPTSPIPSLGNVSETASGSVTQPK 209
>AF146277-1|AAD34595.1| 639|Homo sapiens adapter protein CMS
protein.
Length = 639
Score = 29.9 bits (64), Expect = 7.0
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Frame = -1
Query: 373 EKSPKNLKTQTEIKTPVKIDFLEEVANPSWSDNSNNEIIKHRASEPMGSDVTVIEDSGDI 194
E P+N + + E+K ID EEV WS NN++ ++ +VT D G+
Sbjct: 118 EYIPQN-EDELELKVGDIIDINEEVEEGWWSGTLNNKLGLFPSNFVKELEVT---DDGET 173
Query: 193 KLVYEETEGVKSPPKT---QQANKLETKSKQNTSPK 95
+++E V + P + N ET S T PK
Sbjct: 174 HEAQDDSETVLAGPTSPIPSLGNVSETASGSVTQPK 209
>L05425-1|AAC37588.1| 731|Homo sapiens nucleolar GTPase protein.
Length = 731
Score = 29.5 bits (63), Expect = 9.3
Identities = 18/73 (24%), Positives = 31/73 (42%)
Frame = -1
Query: 325 VKIDFLEEVANPSWSDNSNNEIIKHRASEPMGSDVTVIEDSGDIKLVYEETEGVKSPPKT 146
VK E + P +S+ E++ A G +VT G ++ EETE
Sbjct: 460 VKPPNAEPLVAPQLLPSSSLEVVPEAAQNNPGEEVTETAGEGSESIIKEETEENSHCDAN 519
Query: 145 QQANKLETKSKQN 107
+ ++ T+ +QN
Sbjct: 520 TEMQQILTRVRQN 532
>BC009250-1|AAH09250.1| 731|Homo sapiens guanine nucleotide binding
protein-like 2 (nucleolar) protein.
Length = 731
Score = 29.5 bits (63), Expect = 9.3
Identities = 18/73 (24%), Positives = 31/73 (42%)
Frame = -1
Query: 325 VKIDFLEEVANPSWSDNSNNEIIKHRASEPMGSDVTVIEDSGDIKLVYEETEGVKSPPKT 146
VK E + P +S+ E++ A G +VT G ++ EETE
Sbjct: 460 VKPPNAEPLVAPQLLPSSSLEVVPEAAQNNPGEEVTETAGEGSESIIKEETEENSHCDAN 519
Query: 145 QQANKLETKSKQN 107
+ ++ T+ +QN
Sbjct: 520 TEMQQILTRVRQN 532
>BC000107-1|AAH00107.1| 731|Homo sapiens guanine nucleotide binding
protein-like 2 (nucleolar) protein.
Length = 731
Score = 29.5 bits (63), Expect = 9.3
Identities = 18/73 (24%), Positives = 31/73 (42%)
Frame = -1
Query: 325 VKIDFLEEVANPSWSDNSNNEIIKHRASEPMGSDVTVIEDSGDIKLVYEETEGVKSPPKT 146
VK E + P +S+ E++ A G +VT G ++ EETE
Sbjct: 460 VKPPNAEPLVAPQLLPSSSLEVVPEAAQNNPGEEVTETAGEGSESIIKEETEENSHCDAN 519
Query: 145 QQANKLETKSKQN 107
+ ++ T+ +QN
Sbjct: 520 TEMQQILTRVRQN 532
>AL513220-1|CAI15784.1| 731|Homo sapiens guanine nucleotide binding
protein-like 2 (nucleolar) protein.
Length = 731
Score = 29.5 bits (63), Expect = 9.3
Identities = 18/73 (24%), Positives = 31/73 (42%)
Frame = -1
Query: 325 VKIDFLEEVANPSWSDNSNNEIIKHRASEPMGSDVTVIEDSGDIKLVYEETEGVKSPPKT 146
VK E + P +S+ E++ A G +VT G ++ EETE
Sbjct: 460 VKPPNAEPLVAPQLLPSSSLEVVPEAAQNNPGEEVTETAGEGSESIIKEETEENSHCDAN 519
Query: 145 QQANKLETKSKQN 107
+ ++ T+ +QN
Sbjct: 520 TEMQQILTRVRQN 532
>AL034379-1|CAI20546.1| 731|Homo sapiens guanine nucleotide binding
protein-like 2 (nucleolar) protein.
Length = 731
Score = 29.5 bits (63), Expect = 9.3
Identities = 18/73 (24%), Positives = 31/73 (42%)
Frame = -1
Query: 325 VKIDFLEEVANPSWSDNSNNEIIKHRASEPMGSDVTVIEDSGDIKLVYEETEGVKSPPKT 146
VK E + P +S+ E++ A G +VT G ++ EETE
Sbjct: 460 VKPPNAEPLVAPQLLPSSSLEVVPEAAQNNPGEEVTETAGEGSESIIKEETEENSHCDAN 519
Query: 145 QQANKLETKSKQN 107
+ ++ T+ +QN
Sbjct: 520 TEMQQILTRVRQN 532
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,781,790
Number of Sequences: 237096
Number of extensions: 1281813
Number of successful extensions: 3642
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3624
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -