Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_A17
(592 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g26540.1 68414.m03234 agenet domain-containing protein contai... 36 0.027
At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro... 34 0.062
At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profi... 31 0.57
At1g42440.1 68414.m04894 expressed protein contains Pfam domain,... 31 0.57
At1g43620.2 68414.m05008 UDP-glucose:sterol glucosyltransferase,... 31 0.76
At1g43620.1 68414.m05007 UDP-glucose:sterol glucosyltransferase,... 31 0.76
At3g09360.1 68416.m01110 transcription factor IIB (TFIIB) family... 30 1.3
At2g30575.1 68415.m03725 glycosyl transferase family 8 protein c... 30 1.3
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 29 1.8
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 29 1.8
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 29 1.8
At4g19550.1 68417.m02875 expressed protein 29 1.8
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 29 3.1
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 29 3.1
At1g06230.2 68414.m00659 DNA-binding bromodomain-containing prot... 29 3.1
At1g06230.1 68414.m00658 DNA-binding bromodomain-containing prot... 29 3.1
At5g15510.1 68418.m01816 expressed protein 28 4.1
At1g07840.2 68414.m00851 leucine zipper factor-related similar t... 28 4.1
At1g07840.1 68414.m00850 leucine zipper factor-related similar t... 28 4.1
At3g48910.1 68416.m05343 expressed protein 28 5.4
At4g26670.1 68417.m03842 mitochondrial import inner membrane tra... 27 7.1
At3g54350.2 68416.m06007 forkhead-associated domain-containing p... 27 7.1
At3g54350.1 68416.m06006 forkhead-associated domain-containing p... 27 7.1
At1g71695.1 68414.m08281 peroxidase 12 (PER12) (P12) (PRXR6) ide... 27 7.1
>At1g26540.1 68414.m03234 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 695
Score = 35.5 bits (78), Expect = 0.027
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Frame = -1
Query: 415 KPTKIDSFIKFKAPEKSPKNLKT---QTEI-KTPVKIDFLEEVANPSWSDNSNNEIIK-- 254
KP + S K P + K+L++ EI +TP K F+ A N + ++
Sbjct: 303 KPMRSCSAAKSMTPTSATKHLRSFLNSKEISETPTKAKFVS--ATRELGKNKADAVMNDK 360
Query: 253 -HRASEPMGSDVTVIEDSGDIKLVYEETEGVKSPPKT----QQANKLETKSKQNTSPKD- 92
H P + + + +K ETEG KSP KT + N LE S Q+ P++
Sbjct: 361 THLLITPQETSIAPVITVTPLKQQDAETEGKKSPKKTPEPVKHQNGLENSSTQHEMPEEE 420
Query: 91 --NQFFRQAQGDRCQTANSGNSVQS*SASE 8
N+ R+ + ++ Q +N + ++ + S+
Sbjct: 421 NSNEKSRKRKREQNQNSNLNETDETCNVSK 450
>At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1
protein GI:1279562 from [Medicago sativa]
Length = 557
Score = 34.3 bits (75), Expect = 0.062
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Frame = -1
Query: 457 ETQDEKPATQTEAPKPTKIDSFIKFKAPEKSPKNLKTQTEIKTPVKIDFLEEVANPSWSD 278
+++DEKPAT+ AP K S + + S ++ ++E + P + + + S SD
Sbjct: 194 DSEDEKPATKKAAPAAAKAAS-----SSDSSDEDSDEESEDEKPAQKKADTKASKKSSSD 248
Query: 277 NSNNEIIKHRASEPMGSDVTVIEDSGDIKLVYEETEGVKSP--PKTQQANKLETKSKQNT 104
S+ + E + T + S D+++V E K P P T A +T N
Sbjct: 249 ESS----ESEEDESEDEEETPKKKSSDVEMVDAEKSSAKQPKTPSTPAAGGSKTLFAANL 304
Query: 103 S 101
S
Sbjct: 305 S 305
>At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profile:
PF00076 RNA recognition motif
Length = 636
Score = 31.1 bits (67), Expect = 0.57
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Frame = -1
Query: 430 QTEAPKPTKIDSFIKFKAPEKSPKNLKTQTEIKTPVKIDFLEEVANPSWSDNSNNEIIK- 254
+ E P K++S + + S + + +T+ +TP K+ +E ++ D+S++E I
Sbjct: 53 KAEKTVPKKVES----SSSDASDSDEEEKTK-ETPSKLK--DESSSEEEDDSSSDEEIAP 105
Query: 253 -HRASEPMGSDVTVIEDSGDIKLVYEETEGVKSPPKTQQANKLETKSKQNTSPKDNQ 86
+ EP+ S D EET VK P + K+E+ S + S D +
Sbjct: 106 AKKRPEPIKKAKVESSSSDDDSTSDEETAPVKKQPAVLEKAKVESSSSDDDSSSDEE 162
Score = 30.3 bits (65), Expect = 1.0
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 2/125 (1%)
Frame = -1
Query: 454 TQDEKPATQTEAPKPTKIDSFIKFKAPEKSPKNLKTQTEIKTPVKIDFLEEVANPSWSDN 275
+ DE+ A + P+P K + + S + +T K P ++ + ++ S D+
Sbjct: 98 SSDEEIAPAKKRPEPIKKAKVESSSSDDDSTSDEETAPVKKQPAVLEKAKVESSSSDDDS 157
Query: 274 SNNEIIKHRASEPMGSDVTVIEDSG--DIKLVYEETEGVKSPPKTQQANKLETKSKQNTS 101
S++E +P + IE S D EET +K + K E+ S + S
Sbjct: 158 SSDEETVPVKKQPAVLEKAKIESSSSDDDSSSDEETVPMKKQTAVLEKAKAESSSSDDGS 217
Query: 100 PKDNQ 86
D +
Sbjct: 218 SSDEE 222
>At1g42440.1 68414.m04894 expressed protein contains Pfam domain,
PF04950: Protein of unknown function (DUF663)
Length = 793
Score = 31.1 bits (67), Expect = 0.57
Identities = 19/89 (21%), Positives = 41/89 (46%)
Frame = -1
Query: 337 IKTPVKIDFLEEVANPSWSDNSNNEIIKHRASEPMGSDVTVIEDSGDIKLVYEETEGVKS 158
+K P ++ + + D+ + E++K +PM + VIE++ D L E+T +
Sbjct: 305 LKDPFPLNERKNQNSMELDDSHDEEVLKSLVPDPMKQEPLVIENTPD-PLAGEQTWPTEE 363
Query: 157 PPKTQQANKLETKSKQNTSPKDNQFFRQA 71
N+ + + K+ T P+ ++ A
Sbjct: 364 EMAEADKNQKQGRLKKKTLPRGTSEYQAA 392
>At1g43620.2 68414.m05008 UDP-glucose:sterol glucosyltransferase,
putative similar to UDP-glucose:sterol
glucosyltransferase [Arabidopsis thaliana] GI:2462931;
contains Pfam profile: PF03033 glycosyltransferase
family 28 N-terminal domain
Length = 615
Score = 30.7 bits (66), Expect = 0.76
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = -1
Query: 181 EETEGVKSPPKTQQANKLETKSKQNTSPKDNQFFRQAQG----DRCQTANSG 38
+E EG + K+++A+ LET +T+P+D+ R + G D C+TA G
Sbjct: 11 QELEGEDNGVKSEKASLLETSGSVDTTPEDSG-HRSSDGHRGLDHCETAPVG 61
>At1g43620.1 68414.m05007 UDP-glucose:sterol glucosyltransferase,
putative similar to UDP-glucose:sterol
glucosyltransferase [Arabidopsis thaliana] GI:2462931;
contains Pfam profile: PF03033 glycosyltransferase
family 28 N-terminal domain
Length = 615
Score = 30.7 bits (66), Expect = 0.76
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = -1
Query: 181 EETEGVKSPPKTQQANKLETKSKQNTSPKDNQFFRQAQG----DRCQTANSG 38
+E EG + K+++A+ LET +T+P+D+ R + G D C+TA G
Sbjct: 11 QELEGEDNGVKSEKASLLETSGSVDTTPEDSG-HRSSDGHRGLDHCETAPVG 61
>At3g09360.1 68416.m01110 transcription factor IIB (TFIIB) family
protein contains Pfam domain, PF00382: Transcription
factor TFIIB repeat
Length = 600
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 403 IDSFIKFKAPEKSPKNLKTQTEIK 332
++S APEKSPK KT+T+I+
Sbjct: 513 LESLFDTSAPEKSPKRSKTETDIE 536
>At2g30575.1 68415.m03725 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 610
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -1
Query: 229 SDVT-VIEDSGDIKLVYEETEGVKSPPKTQQANKLETKSKQNTSPKDNQFFRQAQGDR 59
SD+T ED + + ++ EG+K P + Q + N+S K N + +GD+
Sbjct: 47 SDITDKTEDELRLTAIEQDEEGLKEPKRILQDRDFNSVVLSNSSDKSNDTVQSNEGDQ 104
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 592 TWSNNGRILVASSTDGXCSIITF 524
TWS N L SS DG C+++ F
Sbjct: 289 TWSPNASYLALSSQDGYCTLVEF 311
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 592 TWSNNGRILVASSTDGXCSIITF 524
TWS N L SS DG C+++ F
Sbjct: 348 TWSPNASYLALSSQDGYCTLVEF 370
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 592 TWSNNGRILVASSTDGXCSIITF 524
TWS N L SS DG C+++ F
Sbjct: 348 TWSPNASYLALSSQDGYCTLVEF 370
>At4g19550.1 68417.m02875 expressed protein
Length = 212
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/86 (24%), Positives = 38/86 (44%)
Frame = -1
Query: 421 APKPTKIDSFIKFKAPEKSPKNLKTQTEIKTPVKIDFLEEVANPSWSDNSNNEIIKHRAS 242
+PK K+D + + K ++ +K+ + EE P W+++ +NE
Sbjct: 128 SPKRAKLDKPVVVGDQIEYSKQNSEESLLKSQYSEEEEEEAEEPDWNEDYSNEDAYRGNE 187
Query: 241 EPMGSDVTVIEDSGDIKLVYEETEGV 164
E G++ ED D + E+ EGV
Sbjct: 188 ECYGNENLEFEDLDDDE---EDDEGV 210
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -1
Query: 232 GSDVTVIEDSGDIKLVYEETEGV---KSPPKTQQANKLETKSKQNTSPKDNQFF 80
GS+V SG + + +G+ P K+ + +K +TKSK NT N FF
Sbjct: 240 GSNVNSGNASGAAEDSDSDNDGMDLDNDPSKSSKGSKRKTKSKANTLNATNNFF 293
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -1
Query: 232 GSDVTVIEDSGDIKLVYEETEGV---KSPPKTQQANKLETKSKQNTSPKDNQFF 80
GS+V SG + + +G+ P K+ + +K +TKSK NT N FF
Sbjct: 297 GSNVNSGNASGAAEDSDSDNDGMDLDNDPSKSSKGSKRKTKSKANTLNATNNFF 350
>At1g06230.2 68414.m00659 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 766
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -1
Query: 148 TQQANKLETKSKQNTSPKDNQFFRQAQ---GDRCQTANSGNSVQS*SASEG 5
TQ N E K+ +PK NQF+R ++ GD+ A S +S S +G
Sbjct: 360 TQGVN--EHVEKEKRTPKANQFYRNSEFLLGDKLPPAESNKKSKSSSKKQG 408
>At1g06230.1 68414.m00658 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 766
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -1
Query: 148 TQQANKLETKSKQNTSPKDNQFFRQAQ---GDRCQTANSGNSVQS*SASEG 5
TQ N E K+ +PK NQF+R ++ GD+ A S +S S +G
Sbjct: 360 TQGVN--EHVEKEKRTPKANQFYRNSEFLLGDKLPPAESNKKSKSSSKKQG 408
>At5g15510.1 68418.m01816 expressed protein
Length = 497
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 406 KIDSFIKFKAPEKSPKNLKTQTEIKTPVKIDFLE-EVANPSWSDN 275
K+ F K K +N +T+ + K PVK++FLE E WS +
Sbjct: 208 KLTCFSNSKTANKIEEN-QTEEDTKKPVKLEFLEGEKEKNPWSSS 251
>At1g07840.2 68414.m00851 leucine zipper factor-related similar to
charged amino acid rich leucine zipper factor-1
(GI:12061569) {Mus musculus}
Length = 312
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -1
Query: 181 EETEGVKSPPKTQQANKLETKSKQ--NTSPKDNQFFRQA 71
+E +GV PPK + + SKQ + + K+ FFRQA
Sbjct: 163 QEDDGVYRPPKFAPMSMEDKTSKQERDAARKEKHFFRQA 201
>At1g07840.1 68414.m00850 leucine zipper factor-related similar to
charged amino acid rich leucine zipper factor-1
(GI:12061569) {Mus musculus}
Length = 312
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -1
Query: 181 EETEGVKSPPKTQQANKLETKSKQ--NTSPKDNQFFRQA 71
+E +GV PPK + + SKQ + + K+ FFRQA
Sbjct: 163 QEDDGVYRPPKFAPMSMEDKTSKQERDAARKEKHFFRQA 201
>At3g48910.1 68416.m05343 expressed protein
Length = 224
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -1
Query: 439 PATQTEAPKPTKIDSFI-KFKAPEKSPKNLKTQTEIKTPVKIDFLEEVA 296
PA E P KI F K A +K PK + Q E +P K L E++
Sbjct: 38 PADLVERACPEKIIEFKEKMAAKKKKPKPKQKQKETSSPTKSSSLVELS 86
>At4g26670.1 68417.m03842 mitochondrial import inner membrane
translocase subunit Tim17/Tim22/Tim23 family protein
weak similarity to SP|Q9Z0V8 Mitochondrial import inner
membrane translocase subunit TIM17 A {Mus musculus};
contains Pfam profile PF02466: Mitochondrial import
inner membrane translocase subunit Tim17
Length = 210
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 288 EGLATSSKKSILTGVLISVCVFKFLGDFSGALNFMNESIFVGFGASV 428
E S K+++T +VC+F+F GD +G + SIF G+G+ +
Sbjct: 28 EATDNDSSKALVTIPAPAVCLFRFAGDAAGGA--VMGSIF-GYGSGL 71
>At3g54350.2 68416.m06007 forkhead-associated domain-containing
protein / FHA domain-containing protein MSP58 -
nucleolar protein, Mus musculus, EMBL:AF015309
Length = 702
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -2
Query: 138 PTNWKLKVNKTLRPKTISSLDRXKVTDVKQPIAATVSSPKAPRRXS 1
P N + ++ RP ++SSL R D PI V A + S
Sbjct: 333 PCNDDIFLSNNSRPMSVSSLARRNFKDTNSPITTCVRDVSASKEKS 378
>At3g54350.1 68416.m06006 forkhead-associated domain-containing
protein / FHA domain-containing protein MSP58 -
nucleolar protein, Mus musculus, EMBL:AF015309
Length = 702
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -2
Query: 138 PTNWKLKVNKTLRPKTISSLDRXKVTDVKQPIAATVSSPKAPRRXS 1
P N + ++ RP ++SSL R D PI V A + S
Sbjct: 333 PCNDDIFLSNNSRPMSVSSLARRNFKDTNSPITTCVRDVSASKEKS 378
>At1g71695.1 68414.m08281 peroxidase 12 (PER12) (P12) (PRXR6)
identical to SP|Q96520 Peroxidase 12 precursor (EC
1.11.1.7) (Atperox P12) (PRXR6) (ATP4a) {Arabidopsis
thaliana}
Length = 358
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 109 NTSPKDNQFFRQAQGDRCQTANSGNS 32
N P NQFF + C TANS N+
Sbjct: 230 NQDPTMNQFFANSLKRTCPTANSSNT 255
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,520,190
Number of Sequences: 28952
Number of extensions: 179807
Number of successful extensions: 708
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1171109464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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