Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_A16
         (608 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    53   6e-06
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    36   0.57 
UniRef50_Q8I358 Cluster: Exoribonuclease, putative; n=6; Plasmod...    32   9.3  
UniRef50_A4RP26 Cluster: Putative uncharacterized protein; n=1; ...    32   9.3  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 52.8 bits (121), Expect = 6e-06
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = -2

Query: 415 FLLLRWVDELTAHLVLSGYWSP 350
           FLLLRWVDELTAHLVLSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 36.3 bits (80), Expect = 0.57
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -1

Query: 227 AGWWYLPARTQKMSYHQ 177
           A WWYLPART K SYH+
Sbjct: 569 AEWWYLPARTHKRSYHR 585


>UniRef50_Q8I358 Cluster: Exoribonuclease, putative; n=6;
           Plasmodium|Rep: Exoribonuclease, putative - Plasmodium
           falciparum (isolate 3D7)
          Length = 1311

 Score = 32.3 bits (70), Expect = 9.3
 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 187 PTTSDYA-NYNFAGLIFITRYYSFTAEVNREHLLSTYFIRK 68
           PT  DY  N     L   T+Y SF AEV RE  +S Y  +K
Sbjct: 409 PTLGDYLINEGSINLKSFTKYISFIAEVERETFVSQYDFKK 449


>UniRef50_A4RP26 Cluster: Putative uncharacterized protein; n=1;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 400

 Score = 32.3 bits (70), Expect = 9.3
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = -3

Query: 351 HRHLQRKCATHLEI*VL--RSQYSYNGCPTLRTETHYCFTAEISRVVVPTRADSEDVLPP 178
           H H  R C+T + +      S +S +G PT++ +T    T   +    P  AD +D  P 
Sbjct: 20  HHHGLRACSTCIRLTEAPDESAFSVHG-PTMQPQTASALTEIPTSTTKPAAADQQDKPPV 78

Query: 177 VITQIII 157
           VIT++ +
Sbjct: 79  VITEMAV 85


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,881,896
Number of Sequences: 1657284
Number of extensions: 13057038
Number of successful extensions: 24939
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24938
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)