Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_A16
         (608 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    27   0.12 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   8.1  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   8.1  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.1  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +3

Query: 243 SSNEFRFEGWGSRCNYTETLELISQGGWRI 332
           + N  ++ G      Y E +EL  +GGW++
Sbjct: 284 AGNSGKYTGEAGMLGYNEIVELQKEGGWKV 313


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 372 TRWAVSSSTHLSNKK*KDYY 431
           TR + SSSTH S+++  D +
Sbjct: 384 TRKSTSSSTHTSSQQTSDSF 403


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +3

Query: 258 RFEGWGSRCNYTETLELISQGGW 326
           R+ G      Y E +E  + GGW
Sbjct: 293 RYTGERGMMGYNEIVEAQNAGGW 315


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 365 WLLEPIDIYNVNAPPTLRYK 306
           WL  P  + N   P +LR+K
Sbjct: 7   WLTPPHSLGNTVTPVSLRFK 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,280
Number of Sequences: 336
Number of extensions: 3710
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)