Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_A13
(597 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 54 9e-08
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 53 2e-07
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 6e-07
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 47 1e-05
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 45 5e-05
SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) 44 7e-05
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 44 7e-05
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 42 3e-04
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 42 4e-04
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 9e-04
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 40 0.002
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 39 0.004
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 38 0.006
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 36 0.025
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 35 0.043
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.043
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.057
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 35 0.057
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 34 0.076
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 34 0.10
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_23753| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 33 0.18
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 33 0.18
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_23824| Best HMM Match : RRM_1 (HMM E-Value=1.9e-19) 32 0.31
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 32 0.31
SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 32 0.31
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 31 0.71
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 30 1.2
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 30 1.6
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_34561| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_8762| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 29 2.9
SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11) 29 2.9
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_9898| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 28 6.6
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 28 6.6
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 27 8.7
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 54.0 bits (124), Expect = 9e-08
Identities = 24/77 (31%), Positives = 40/77 (51%)
Frame = -1
Query: 378 SSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCM 199
++T+ + NLS T E + EL+ G I R+ + DK+ GF F+ + REDA +
Sbjct: 180 TATIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINFVHREDAARAI 239
Query: 198 RYINGTRLDDRIIRCDW 148
++G D I+ +W
Sbjct: 240 EVLSGFGYDHLILNVEW 256
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/74 (32%), Positives = 43/74 (58%)
Frame = -1
Query: 372 TLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRY 193
++++GN+ + +EEQ+ E++S G + + D+ P G+ F EY +E A + MR
Sbjct: 26 SVFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRN 85
Query: 192 INGTRLDDRIIRCD 151
+NG L+ R +R D
Sbjct: 86 LNGYELNGRALRVD 99
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/79 (27%), Positives = 44/79 (55%)
Frame = -1
Query: 390 LLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDA 211
L + ST+Y+GNL + T +++++ R G + +V + DK + G F+ + R+ A
Sbjct: 5 LAPSKSTVYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSA 64
Query: 210 ENCMRYINGTRLDDRIIRC 154
+N + +N ++ R I+C
Sbjct: 65 QNAVAAVNKKQMFGRTIKC 83
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/80 (30%), Positives = 44/80 (55%)
Frame = -1
Query: 423 HFKGSRSEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGF 244
H G++S+ TLY+ N+ + +E I L+ +CG + +V + D ++ GF
Sbjct: 263 HMNGNKSQAPP----GCTLYVYNIGYDANQEGITALFGQCGIVNKVDIMWDWQRQQCKGF 318
Query: 243 CFVEYYAREDAENCMRYING 184
CFV +E+A+N ++ +NG
Sbjct: 319 CFVTMATQEEAQNAIQTLNG 338
Score = 30.7 bits (66), Expect = 0.93
Identities = 15/82 (18%), Positives = 38/82 (46%)
Frame = -1
Query: 402 EQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYA 223
E ++ ++ +TL + + T++ ++ + + K GF FV+Y
Sbjct: 38 EPQEAQESKTTLIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNT 97
Query: 222 REDAENCMRYINGTRLDDRIIR 157
EDA+ + +NG + +++++
Sbjct: 98 TEDAQKAIDKLNGFTIGNKVLK 119
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/111 (23%), Positives = 52/111 (46%)
Frame = -1
Query: 489 YKMKRSYDSMNSSIEISSYRDQHFKGSRSEQEKLLKASSTLYIGNLSFYTTEEQIYELYS 310
Y M++S + + + + + + +++++ L +Y+G+++F EE I +
Sbjct: 64 YAMEQSVQQVLAKQQALQAQQMNALQTAAQKQRALALMCRVYVGSINFELREEHIRTAFH 123
Query: 309 RCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYINGTRLDDRIIR 157
G I ++ + D GF FVEY E A+ + +NG L R I+
Sbjct: 124 PFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQMNGVLLGGRNIK 174
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/74 (28%), Positives = 41/74 (55%)
Frame = -1
Query: 369 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYI 190
L++ N+ E+ I+EL+S G+I+ + + LD+ G+ VEY ++A++ + +
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEAL 354
Query: 189 NGTRLDDRIIRCDW 148
NG + + I DW
Sbjct: 355 NGAEMLGQNISVDW 368
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/67 (29%), Positives = 39/67 (58%)
Frame = -1
Query: 375 STLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMR 196
++L + NL++ TT E + +++ + GD+ + + D+ GF FV +Y + DAE+ M
Sbjct: 16 TSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDAEDAMD 75
Query: 195 YINGTRL 175
++ T L
Sbjct: 76 CMDATCL 82
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Frame = -1
Query: 411 SRSEQEKLLKASST-----LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCG 247
SRS + K S T LY+ +L+ ++ + E++S G ++ V + D+ G
Sbjct: 1140 SRSRSPRRRKRSPTPKPTKLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRG 1199
Query: 246 FCFVEYYAREDAENCMRYINGTRLDDRII 160
F +VEY E+ E +++++G ++D + I
Sbjct: 1200 FAYVEYVDPEECEKALKHMDGGQIDGQEI 1228
>SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23)
Length = 201
Score = 44.4 bits (100), Expect = 7e-05
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = -1
Query: 378 SSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCM 199
++ LY+GNL ++ + + G + +V + + P GF FVEY DAE +
Sbjct: 3 TTKLYVGNLGRNADSSELERAFEKFGRLSKVWVA-----RNPPGFAFVEYEDYRDAEEAV 57
Query: 198 RYINGTRLDDRIIRCDW 148
R ++G + DR IR ++
Sbjct: 58 RELDGANVCDRTIRVEF 74
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/73 (30%), Positives = 41/73 (56%)
Frame = -1
Query: 375 STLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMR 196
+T+Y+G L +E I+EL+ + G + V M D+ + G+ FVE+ EDA+ ++
Sbjct: 13 ATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIK 72
Query: 195 YINGTRLDDRIIR 157
+N ++ + IR
Sbjct: 73 VMNMIKVYGKPIR 85
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = -1
Query: 369 LYIGNLSFYTTEEQIYELYSRCGDIRR---VIMGLDKYKKTPCGFCFVEYYAREDAENCM 199
L+IGNL +E I ++ + G+I + G + P G+CFVE+ +EDA +
Sbjct: 389 LWIGNLDKRLSEFNILKILQQFGEIEHFQFLFHGNGPNRGEPRGYCFVEFKKKEDARKAL 448
Query: 198 RYINGTRLDDRIIRCDW 148
R +N + R + DW
Sbjct: 449 RGLNKKIVLSRALVVDW 465
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/54 (33%), Positives = 34/54 (62%)
Frame = -1
Query: 369 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAE 208
L++G LS+ TT+E + E +S+ G++ V + +D P GF FV++ + +A+
Sbjct: 31 LFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEAD 84
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 41.9 bits (94), Expect = 4e-04
Identities = 27/100 (27%), Positives = 48/100 (48%)
Frame = -1
Query: 498 EQVYKMKRSYDSMNSSIEISSYRDQHFKGSRSEQEKLLKASSTLYIGNLSFYTTEEQIYE 319
E V M + ++ S E + D + S+ + +K T++I NLSF +T++ I
Sbjct: 377 EDVKHMSKDDNNNEKSDEDDASEDDNH--SQRSKPSDVKEGLTVFIRNLSFDSTQKNITN 434
Query: 318 LYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCM 199
L+ + GDI + +D + G FV+Y + E C+
Sbjct: 435 LFKQFGDIAYCKVVVDHLTQHSKGSAFVKYRSAESVTQCL 474
Score = 35.5 bits (78), Expect = 0.033
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = -1
Query: 375 STLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKY--KKTPCGFCFVEYYAREDAENC 202
S L I NL+F TE + E +S G++ + K + GF FV++ DA
Sbjct: 247 SRLIIRNLAFNCTEAILKETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQFTNVFDAAKA 306
Query: 201 MRYINGTRLDDRIIRCDW 148
+ +N ++ R + DW
Sbjct: 307 LEEMNAKKILGRPVAVDW 324
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/70 (30%), Positives = 39/70 (55%)
Frame = -1
Query: 366 YIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYIN 187
YIGNL F E + + +SR D+ V + D+ + P GF FV + ++++ E+ + ++
Sbjct: 233 YIGNLDFKVNEADLQDRFSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINELD 291
Query: 186 GTRLDDRIIR 157
G D R ++
Sbjct: 292 GQEFDGRSMK 301
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 40.7 bits (91), Expect = 9e-04
Identities = 22/71 (30%), Positives = 39/71 (54%)
Frame = -1
Query: 372 TLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRY 193
TL++ NL F E +I EL+S+ G +++V + ++ K P G+ +VEY A +
Sbjct: 172 TLFVSNLPFDAKESEIEELFSKHGVVKQVRLVTNRAGK-PKGYGYVEYEQESSASTAVLT 230
Query: 192 INGTRLDDRII 160
++ T + R I
Sbjct: 231 LDKTEVKGRTI 241
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = -1
Query: 366 YIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYIN 187
YIGNLS+ E+ + E + C D+ V + D+ P GF FV + ++E+ E + +
Sbjct: 8 YIGNLSYSVDEQALEEKFHGC-DVVDVKVITDRETGRPRGFGFVTFGSKEEMEKAIDEFD 66
Query: 186 GTRLDDR 166
G D R
Sbjct: 67 GQDFDGR 73
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/85 (25%), Positives = 40/85 (47%)
Frame = -1
Query: 411 SRSEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVE 232
+ +E+ K + LY+G+L F TE + ++ G + V + D G+ FV+
Sbjct: 230 AEAERLKQPLGPTRLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQ 289
Query: 231 YYAREDAENCMRYINGTRLDDRIIR 157
+ E A+ M +NG L R ++
Sbjct: 290 FREAEAAKRAMEQMNGFELAGRPLK 314
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = -1
Query: 369 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYI 190
++IG L Y E+Q+ EL S G++R + D G+ F EY + ++ +
Sbjct: 675 IFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAFCEYVDLGITDVAIQGL 734
Query: 189 NGTRLDDR 166
NG +L D+
Sbjct: 735 NGMQLGDK 742
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/89 (24%), Positives = 43/89 (48%)
Frame = -1
Query: 423 HFKGSRSEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGF 244
H + + +K +++IGNL F EE + EL++ CG++ V + D+ GF
Sbjct: 40 HIRVDLASNDKAHDHQRSVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGF 99
Query: 243 CFVEYYAREDAENCMRYINGTRLDDRIIR 157
+V + +++ ++ +N R IR
Sbjct: 100 GYVLFESKDAVVFALK-MNNAEFKGRKIR 127
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = -1
Query: 402 EQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYA 223
+ K+ + T+++ NL T E + +S CGDI+ + MG D K P + ++E+
Sbjct: 63 DANKVEEIRRTVFVNNLDPEITAEMLLSFFSSCGDIKYIRMGGDDGK--PTRYAYIEFAE 120
Query: 222 REDAENCMRY 193
+ + ++Y
Sbjct: 121 TQAIVSALQY 130
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = -1
Query: 372 TLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRY 193
+LY+GNL T+E I ++++ + R M K P +CFVE+ DA+
Sbjct: 370 SLYVGNLDPKCTQELICSIFNKIAKVVRCKMINSPTDKGP--YCFVEFETHADAQEAKFR 427
Query: 192 INGTRLDDRIIRCDW 148
++ + D+ ++ +W
Sbjct: 428 MDQRTVMDKKLKVNW 442
Score = 31.9 bits (69), Expect(2) = 0.11
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = -1
Query: 396 EKLLKASSTLYIGNLSFYTTEEQIYELYS-RCGDI---RRVIMGLDKYKKTPCGFCFVEY 229
EKL K +S LY SF+ + +++S D+ R V + D K GF FV +
Sbjct: 504 EKLSKPTSRLYFW--SFHEWSTFLDDIFSYTVPDLFVAREVRVVKDPAKNKSKGFGFVSF 561
Query: 228 YAREDAENCMRYINGTRLDDRIIRCDWDA 142
REDA + ++ + + ++ +W A
Sbjct: 562 VRREDAAKAIAEMDSVTIGGKQVKTNWAA 590
Score = 20.6 bits (41), Expect(2) = 0.11
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 54 WRLWKNNSTENKP 16
W KNN T+ KP
Sbjct: 588 WAARKNNPTQTKP 600
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = -1
Query: 375 STLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMR 196
+ L++ L+ TT+E + ++SR G I + D+ + F+E+ ED E
Sbjct: 120 NVLFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERAYF 179
Query: 195 YINGTRLDDRIIRCDW 148
++ +DDR I D+
Sbjct: 180 KMDNVLIDDRRIHVDF 195
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 35.5 bits (78), Expect = 0.033
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -1
Query: 369 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCM 199
L + L + TTE ++ E ++R G+I + LD + GF FV + EDA+N +
Sbjct: 117 LIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVL 173
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 35.1 bits (77), Expect = 0.043
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = -1
Query: 405 SEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDI-RRVIMGLDKYKKTPCGFCFVEY 229
SE EKL K ++IG L++ TTEE + + +S+ G I VIM D + GF FV Y
Sbjct: 44 SESEKLRK----IFIGGLNWNTTEEGLKDYFSQWGTIVDCVIMKRDGRSR---GFGFVTY 96
Query: 228 YAREDAENCMRYINGTRLDDRII 160
+ + ++ + LDDR I
Sbjct: 97 ESSDSVNEVLKKKDHV-LDDREI 118
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 35.1 bits (77), Expect = 0.043
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -1
Query: 339 TEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYINGTRLDDRII 160
++E I +++ G++ + D+ G+ FV Y +DA +R +NG RL ++ +
Sbjct: 39 SQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNKTL 98
Query: 159 R 157
+
Sbjct: 99 K 99
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 34.7 bits (76), Expect = 0.057
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = -1
Query: 378 SSTLYIGNLSF-YTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENC 202
S TL++ L + I EL+S+ G++ + ++ GF FV+Y E+AE
Sbjct: 204 SRTLFVDRLPRDFKNGGLIKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEKG 263
Query: 201 MRYINGTRLDDRIIR 157
R NG +++ IR
Sbjct: 264 QRAHNGRQVEGSNIR 278
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 34.7 bits (76), Expect = 0.057
Identities = 21/77 (27%), Positives = 39/77 (50%)
Frame = -1
Query: 369 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYI 190
+Y+GNL E+ +++++ + G I V + + P F FVE+ DAE+ ++
Sbjct: 263 VYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPP--FAFVEFEDPRDAEDAVKGR 320
Query: 189 NGTRLDDRIIRCDWDAG 139
+G D IR ++ G
Sbjct: 321 DGHEFDGYRIRVEFPRG 337
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 34.3 bits (75), Expect = 0.076
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = -1
Query: 375 STLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYY--AREDAENC 202
++LY+G+L+ TE +YE +S G + + + D + G+ +V + + A
Sbjct: 13 ASLYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHDAALEA 72
Query: 201 MRYINGTRLDDR 166
+ ++G L+D+
Sbjct: 73 IARVDGMLLNDK 84
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 33.9 bits (74), Expect = 0.10
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = -1
Query: 366 YIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYIN 187
Y+G L+ E+ ++ + GDI V + +D GF FVE+ ED + +N
Sbjct: 8 YVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMN 67
Query: 186 GTRLDDRIIR 157
+ L R IR
Sbjct: 68 ESELFGRTIR 77
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = -1
Query: 375 STLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMR 196
S +YIGN+ ++ +I + G +R V + + P GF F + R DAE+ +R
Sbjct: 2 SRVYIGNIGDNASKREIEREFETFGPLRDVWVA-----RNPPGFAFCVFEDRRDAEDAVR 56
Query: 195 YING 184
++G
Sbjct: 57 ELDG 60
>SB_23753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 517
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Frame = -1
Query: 438 SYRDQHF----KGSRSEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIM 280
S + HF K S E+E L + TL++ N+ Y T+ I +L+ +CG ++ V +
Sbjct: 17 SCKSNHFLYFKKHSVREEESLRPSDKTLFVINVPPYCTKLAIKKLFGKCGGVKSVYL 73
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/61 (22%), Positives = 34/61 (55%)
Frame = -1
Query: 369 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYI 190
+++G + E+++ ++ G I V + +D + G+ FV Y +++DA+ C++ +
Sbjct: 76 VFVGKIPRDLYEDELVPVFETAGPIYEVRLMMD-FNGQNRGYAFVVYTSKDDAKRCVKTL 134
Query: 189 N 187
N
Sbjct: 135 N 135
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 33.1 bits (72), Expect = 0.18
Identities = 21/76 (27%), Positives = 42/76 (55%)
Frame = -1
Query: 387 LKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAE 208
+ AS ++IG LS TE + EL+++ G ++ V++ D+ K+ FV +++ + AE
Sbjct: 520 MAASFPVWIGGLSEDVTENVLLELFNKFGPVKDVVILRDESGKSRQS-GFVHFWSSDVAE 578
Query: 207 NCMRYINGTRLDDRII 160
+NG + +I+
Sbjct: 579 AANVGMNGCDILGKIV 594
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/70 (20%), Positives = 34/70 (48%)
Frame = -1
Query: 384 KASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAEN 205
K S ++IG + E+++ ++ CG I + +D GF F + +++A+N
Sbjct: 149 KVCSQVFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQN 208
Query: 204 CMRYINGTRL 175
++ ++ +
Sbjct: 209 AVKKLDNKEI 218
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = -1
Query: 387 LKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAE 208
+K +Y+ NLS TEE++ E YS+ G + RV K K + FV + R+ A
Sbjct: 325 MKKVKVVYLRNLSPSITEEKLKEEYSQYGAVDRV----KKLK----DYAFVHFTERDHAL 376
Query: 207 NCMRYINGTRLD 172
+ +G +D
Sbjct: 377 KAIEETDGKEMD 388
>SB_23824| Best HMM Match : RRM_1 (HMM E-Value=1.9e-19)
Length = 623
Score = 32.3 bits (70), Expect = 0.31
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = -1
Query: 468 DSMNSSIEISSYRDQHFKGSRSEQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRR 289
DS+ + + + ++ GS E + TL++ NLSF +TEE + + ++ G ++
Sbjct: 507 DSLEKTDKDADQSEEQNAGSDEEDTE----GVTLFVKNLSFESTEEALKQKFAAVGPVKS 562
Query: 288 VIMGLDKYKKTPCG 247
+ K K P G
Sbjct: 563 ATIAKKKDPKKPGG 576
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -1
Query: 414 GSRSEQEKLLKA--SSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFC 241
G S ++ + K S L + +L F TT +++ E + +CG++ + + ++ K+T
Sbjct: 221 GKESNEDLMAKVIQSKKLMVQDLDFDTTVDELREYFEKCGELTGIDLLINSEKRTCAAIV 280
Query: 240 F 238
F
Sbjct: 281 F 281
>SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1572
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = -1
Query: 360 GNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYINGT 181
G L E I ++S G + RV+M + + FV Y + +A N MR +NG
Sbjct: 55 GGLMCGVDRESITRVFSLYGTLERVVMLPQR------SYSFVSYKSHNNALNAMRNLNGK 108
Query: 180 RLDD 169
LD+
Sbjct: 109 ALDE 112
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 31.1 bits (67), Expect = 0.71
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = -1
Query: 384 KASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGF-CFVEYYAREDAE 208
++ +TLY+G L TE+ + + + + G++R + M + C F CF A E A
Sbjct: 301 RSITTLYVGGLEGKVTEQDLRDHFYQFGELRSISM----VPRQNCAFVCFTSRAAAEAAA 356
Query: 207 NCMRYINGTRLDDRIIRCDW 148
+ R N L R ++ W
Sbjct: 357 D--RSFNKLILKGRRLKIMW 374
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 31.1 bits (67), Expect = 0.71
Identities = 17/70 (24%), Positives = 36/70 (51%)
Frame = -1
Query: 396 EKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYARE 217
+K +K S L L F+ + + +++S G + V + K+ GF F+E+ +++
Sbjct: 82 KKAMKLSQQLE-EKLPFHADHDWLKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQ 140
Query: 216 DAENCMRYIN 187
AE+ ++ N
Sbjct: 141 QAEHVVQMFN 150
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = -1
Query: 390 LLKASST-LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYARED 214
L +A T +YIG+L ++ +I + G ++ V + + P GF F + R D
Sbjct: 26 LRRAEMTKVYIGSLGDNASKREIENEFGYYGPLKDVWVA-----RNPPGFAFCIFDDRRD 80
Query: 213 AENCMRYINGTRLDDRIIRCDWDAG 139
AE+ +R ++G + + +R + G
Sbjct: 81 AEDAVRELDGRYICGQRVRVELAKG 105
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 30.7 bits (66), Expect = 0.93
Identities = 20/79 (25%), Positives = 39/79 (49%)
Frame = -1
Query: 402 EQEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYA 223
+Q++ + T++IG L E I E++ CG+I + + K + FC + + A
Sbjct: 342 KQKEKPEGCRTVFIGGLPESINEHIINEIFYVCGEITSIRISKGKGENAR-KFCHLRFGA 400
Query: 222 REDAENCMRYINGTRLDDR 166
+E + + + +G RL R
Sbjct: 401 KESVDTAVLF-SGYRLYTR 418
>SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = -1
Query: 387 LKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAE 208
+ S+ +Y G L E + + G +R + M L G+ FVE+ DA+
Sbjct: 1 MSRSTRVYFGRLPRDCRERDLEKFVRGYGRVREISMKL--------GYGFVEFDDYRDAD 52
Query: 207 NCMRYINGTR-LDDRIIRC 154
+C+ +NG L +R I C
Sbjct: 53 DCVYDLNGRNLLGEREIAC 71
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/54 (22%), Positives = 30/54 (55%)
Frame = -1
Query: 369 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAE 208
L++G + + + ++ + + +++ G+IR ++ D+ K G+ FV + AE
Sbjct: 12 LFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAE 65
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/66 (21%), Positives = 31/66 (46%)
Frame = -1
Query: 384 KASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAEN 205
++ + ++IG + E+++ L +CG+IR + +D GF F + + A
Sbjct: 150 ESGTEVFIGKIPRDCLEDELIPLLEKCGEIREFRLQMDPATGLNKGFAFCTFTEQTSAYQ 209
Query: 204 CMRYIN 187
+ +N
Sbjct: 210 AITTLN 215
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -1
Query: 381 ASSTLYIGNLSFYTTEEQIYELYSRCGDIR-RVIMGLDKYKKTPCGFCFVEYYARE 217
A YIGNLS+ E+ + E + C + RVI D+ P GF FV A++
Sbjct: 80 AEHRCYIGNLSYSVDEQALEEKFHDCNVVDVRVI--TDRETGRPRGFGFVTLEAKK 133
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = -1
Query: 369 LYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYI 190
LYIGNL+F + E +I + + G + +V + DK GF FV + + + +
Sbjct: 11 LYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIEKM 69
Query: 189 NGTRLDDRII 160
N + + R I
Sbjct: 70 NQSSVGGRNI 79
>SB_34561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 448
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -1
Query: 321 ELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYINGTRLD 172
EL+S G ++R + D ++ G V + REDA+ ++ NG LD
Sbjct: 1 ELFSEFGQVKRSCVHYDASGRSH-GTAEVVFVRREDAQQALKQYNGVPLD 49
>SB_8762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 124 STFNESSIPVTANYSVIQPR 183
ST+N+ + P++A Y VI+PR
Sbjct: 465 STYNDDTSPISATYKVIEPR 484
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = -1
Query: 390 LLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDA 211
L ++ T+++G+L T E I+E +S G+ + + GF FV +E
Sbjct: 37 LEQSRRTIFVGSLHPSTVESTIFEYFSTLGEQVEHVKCIRTLSGKSKGFAFVRLRKKEAV 96
Query: 210 ENCM 199
E+ +
Sbjct: 97 ESVL 100
>SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11)
Length = 67
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -1
Query: 378 SSTLYIGNLSFYTTEEQIYELYSRCG--DIRRVIMGLDKYKKTPCGFCFVEYYAREDAEN 205
S+ +Y+G L + T E+ + + + G IR +I+ G+ FVE+ +DAE+
Sbjct: 2 SNRVYLGRLPYGTREDDVKKFFYTYGRFKIREIIL--------KDGYGFVEFDYSDDAED 53
Query: 204 CMRYINGTRL 175
+ NG ++
Sbjct: 54 AVYECNGKKM 63
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -1
Query: 303 GDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMRYINGTRLDDRIIRCD 151
G+I V + DK GFCF+ Y + + NG +L R IR D
Sbjct: 3 GEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNGIKLGGRTIRVD 53
>SB_9898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 6 SGLWVYFLCYYFSITATPTVIVSSIFISNLASXFCH 113
SG+W YF+ Y + P+V +S++ ++ AS F +
Sbjct: 718 SGIWDYFIKSYHELLEKPSVSISTVALT-AASSFVY 752
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +3
Query: 171 HPASCHLYT--SYNFRHLPAHSILQ-NKIHKVFSC-ICLVPLLLFLYRRIVNTVH 323
HP H Y S RHLP+H ILQ + I++ S I +P + Y + T H
Sbjct: 704 HPPVSHTYRHKSAGIRHLPSHIILQVSHIYRHTSAGISHLPSQIRRYPTLTTTHH 758
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = -1
Query: 399 QEKLLKASSTLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAR 220
+EKL K + LYI L TT++ + L + G I LDK G+ FV++ +
Sbjct: 94 EEKLSKTN--LYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFESP 151
Query: 219 EDAENCM 199
A+ +
Sbjct: 152 ISAQKAV 158
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/90 (22%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Frame = -1
Query: 402 EQEKLLKASSTLYIGNLSFYTTEEQIYELYSR----CGDIRRVIMGLDKY--KKTPC--G 247
+Q+ + + +Y GNL F T++++ ++ D+ V +++ ++ P G
Sbjct: 41 DQKMVFADPNKVYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRG 100
Query: 246 FCFVEYYAREDAENCMRYINGTRLDDRIIR 157
F FV + EDA+ ++ +NG + R ++
Sbjct: 101 FGFVTFANPEDAQTAVKSLNGKEVQGRTLK 130
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = -1
Query: 375 STLYIGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYYAREDAENCMR 196
S L+I +L T+ + + + G + + +DK F FV Y A+N ++
Sbjct: 277 SNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQ 336
Query: 195 YINGTRL 175
++NG ++
Sbjct: 337 HMNGFQI 343
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,644,641
Number of Sequences: 59808
Number of extensions: 292046
Number of successful extensions: 863
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -