Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_A13
         (597 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease pr...    24   3.2  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   9.9  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   9.9  

>AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease
           protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 384 KASSTLYIGNLSFYTTEEQIYELYSRCGDIRR 289
           + +S L I +  F T EE  +   SRCG+I R
Sbjct: 41  ECASLLAIYSKRFTTPEETQFLASSRCGEIGR 72


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 132 Q*IQHPSHSELFCHPASCHLYTSYNFRHLPAH 227
           Q + HP+H     HPA  H    + ++  P+H
Sbjct: 176 QHVLHPAHHPALLHPA-YHTGLHHYYQPSPSH 206


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 132 Q*IQHPSHSELFCHPASCHLYTSYNFRHLPAH 227
           Q + HP+H     HPA  H    + ++  P+H
Sbjct: 176 QHVLHPAHHPALLHPA-YHTGLHHYYQPSPSH 206


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,866
Number of Sequences: 2352
Number of extensions: 9925
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)