Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_A07
         (700 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...   135   3e-34
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    47   1e-07
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    38   1e-04

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score =  135 bits (327), Expect = 3e-34
 Identities = 61/77 (79%), Positives = 74/77 (96%)
 Frame = -2

Query: 699 RSAXRHYYAFVPFSAGPRSCVGCKYAMLKLKVILSTILRNFRVISDLKESDFKLQADIIL 520
           ++A RHYYAFVPFSAGPRSCVG KYAMLKLK++LSTILRNFRV SD+KES+F+LQADIIL
Sbjct: 469 KTANRHYYAFVPFSAGPRSCVGRKYAMLKLKIVLSTILRNFRVRSDVKESEFRLQADIIL 528

Query: 519 KRAEGFQVRLQPRKRMA 469
           KRA+GF++RL+PRK++A
Sbjct: 529 KRADGFKIRLEPRKQVA 545


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 47.2 bits (107), Expect = 1e-07
 Identities = 20/41 (48%), Positives = 29/41 (70%)
 Frame = -2

Query: 693 AXRHYYAFVPFSAGPRSCVGCKYAMLKLKVILSTILRNFRV 571
           A RH   ++PF  GPR+C+G ++A+ + KV L TILRN +V
Sbjct: 427 ASRHPMHYLPFGDGPRNCIGARFAVYQTKVGLITILRNHKV 467


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 37.5 bits (83), Expect = 1e-04
 Identities = 20/49 (40%), Positives = 29/49 (59%)
 Frame = -2

Query: 666 PFSAGPRSCVGCKYAMLKLKVILSTILRNFRVISDLKESDFKLQADIIL 520
           PF AG R C G ++  L L++IL+ I+R F +I    E +  LQ + IL
Sbjct: 458 PFGAGRRICPGKRFVDLALQLILAKIIREFEII---VEEELDLQFEFIL 503


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,200
Number of Sequences: 438
Number of extensions: 2905
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)