Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_A04
(866 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 23 4.8
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 4.8
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 23 4.8
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 6.4
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 6.4
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 6.4
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 6.4
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 6.4
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 6.4
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 6.4
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 6.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 6.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 6.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 6.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 6.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 6.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 6.4
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 6.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 6.4
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 22.6 bits (46), Expect = 4.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 367 QDLQKILELGLSIGINGCSLRSK 299
++L+KIL LS G N C+ + K
Sbjct: 58 RELKKILPDALSTGCNKCNEKQK 80
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 22.6 bits (46), Expect = 4.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 448 LPLDSEGTTANCTPDSTEVASQKILVALPS 537
+PL + + TPDS A K L +LPS
Sbjct: 651 MPLLPRPISCHTTPDSFIEAPNKTLPSLPS 680
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 22.6 bits (46), Expect = 4.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 367 QDLQKILELGLSIGINGCSLRSK 299
++L+KIL LS G N C+ + K
Sbjct: 58 RELKKILPDALSTGCNKCNEKQK 80
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 371 RARPAENPGVGPIY 330
R RP NP GP+Y
Sbjct: 139 RLRPPPNPRFGPMY 152
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 371 RARPAENPGVGPIY 330
R RP NP GP+Y
Sbjct: 139 RLRPPPNPRFGPMY 152
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 371 RARPAENPGVGPIY 330
R RP NP GP+Y
Sbjct: 139 RLRPPPNPRFGPMY 152
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 371 RARPAENPGVGPIY 330
R RP NP GP+Y
Sbjct: 139 RLRPPPNPRFGPMY 152
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 371 RARPAENPGVGPIY 330
R RP NP GP+Y
Sbjct: 139 RLRPPPNPRFGPMY 152
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 371 RARPAENPGVGPIY 330
R RP NP GP+Y
Sbjct: 139 RLRPPPNPRFGPMY 152
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 371 RARPAENPGVGPIY 330
R RP NP GP+Y
Sbjct: 139 RLRPPPNPRFGPMY 152
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 371 RARPAENPGVGPIY 330
R RP NP GP+Y
Sbjct: 388 RLRPPPNPRFGPMY 401
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 371 RARPAENPGVGPIY 330
R RP NP GP+Y
Sbjct: 388 RLRPPPNPRFGPMY 401
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 371 RARPAENPGVGPIY 330
R RP NP GP+Y
Sbjct: 388 RLRPPPNPRFGPMY 401
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 371 RARPAENPGVGPIY 330
R RP NP GP+Y
Sbjct: 388 RLRPPPNPRFGPMY 401
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 371 RARPAENPGVGPIY 330
R RP NP GP+Y
Sbjct: 388 RLRPPPNPRFGPMY 401
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 371 RARPAENPGVGPIY 330
R RP NP GP+Y
Sbjct: 388 RLRPPPNPRFGPMY 401
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 371 RARPAENPGVGPIY 330
R RP NP GP+Y
Sbjct: 387 RLRPPPNPRFGPMY 400
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 371 RARPAENPGVGPIY 330
R RP NP GP+Y
Sbjct: 372 RLRPPPNPRFGPMY 385
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 371 RARPAENPGVGPIY 330
R RP NP GP+Y
Sbjct: 388 RLRPPPNPRFGPMY 401
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,711
Number of Sequences: 438
Number of extensions: 4520
Number of successful extensions: 36
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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