Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_A02
         (791 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060885-1|AAL28433.1|  112|Drosophila melanogaster GM04427p pro...    47   3e-05
AE013599-3682|AAF47058.1|  112|Drosophila melanogaster CG5532-PA...    47   3e-05

>AY060885-1|AAL28433.1|  112|Drosophila melanogaster GM04427p
           protein.
          Length = 112

 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 33/94 (35%), Positives = 39/94 (41%)
 Frame = -2

Query: 784 DIIGFAYAATVAAGGVMGYAKXXXXXXXXXXXXXXXXXXXXAYQLSQDPSNYXXXXXXXX 605
           D  G+ YAATVAAGG+MGYAK                    A+  SQD            
Sbjct: 4   DWFGYVYAATVAAGGIMGYAKAGSIPSLGAGLAFGALLGYGAHLNSQDTPRPLLQLGTSL 63

Query: 604 XXXXXXGYRYYNSRKFMPAGLMFCLSVGMFTKLL 503
                 G R+  S K MPAG++  LSV    K L
Sbjct: 64  FLAGLMGARWNRSGKLMPAGMVCMLSVAALVKNL 97


>AE013599-3682|AAF47058.1|  112|Drosophila melanogaster CG5532-PA
           protein.
          Length = 112

 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 33/94 (35%), Positives = 39/94 (41%)
 Frame = -2

Query: 784 DIIGFAYAATVAAGGVMGYAKXXXXXXXXXXXXXXXXXXXXAYQLSQDPSNYXXXXXXXX 605
           D  G+ YAATVAAGG+MGYAK                    A+  SQD            
Sbjct: 4   DWFGYVYAATVAAGGIMGYAKAGSIPSLGAGLAFGALLGYGAHLNSQDTPRPLLQLGTSL 63

Query: 604 XXXXXXGYRYYNSRKFMPAGLMFCLSVGMFTKLL 503
                 G R+  S K MPAG++  LSV    K L
Sbjct: 64  FLAGLMGARWNRSGKLMPAGMVCMLSVAALVKNL 97


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,254,837
Number of Sequences: 53049
Number of extensions: 571894
Number of successful extensions: 966
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)