Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_P22
         (602 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   4.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.0  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -1

Query: 302 CTEPLRSR*IFKSRHFEIKITNYIVYMYTLCRYL 201
           C +  +S   F  RH      NYI + Y L  YL
Sbjct: 136 CVQTEKSVFDFLCRHTVEYFQNYIHFFYQLLLYL 169


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = +1

Query: 493 DETNLYDLNLNRDPQQRPSSASHRSPKMYSXTH 591
           DE + +      + + +PS +   SP+  + TH
Sbjct: 894 DERSFHSNGAKEEDEDKPSVSPLTSPRQPAETH 926


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,586
Number of Sequences: 336
Number of extensions: 2526
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)