Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_P22
         (602 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0787 + 19635858-19635990,19636112-19636183,19637358-196373...    44   1e-04
03_05_0882 + 28467691-28467730,28468386-28468675,28469262-284694...    31   0.93 
09_06_0374 + 22649455-22650024,22650085-22650637,22650812-226511...    29   3.7  
12_02_0485 - 19559680-19560087,19560234-19560293                       27   8.7  
09_02_0207 - 5793848-5794276,5794523-5794645,5794742-5795250,579...    27   8.7  
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468...    27   8.7  

>04_03_0787 +
           19635858-19635990,19636112-19636183,19637358-19637390,
           19637765-19637845,19637956-19638083
          Length = 148

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 18/94 (19%)
 Frame = +3

Query: 348 GLEITKPAMDLILELIYKK------LSVY-----ASDLEVFARHARRCKIQGEDVKLLVR 494
           G+E++ P +  I +L YK       L+ Y     A D+E+FA+HA R  I+ EDV L   
Sbjct: 49  GMEVSDPVVACIADLAYKTVGSSKLLATYITEQLAKDVELFAQHAGRKSIKMEDVILTAH 108

Query: 495 RNKSL-------RSQLESRSPTAALKRKSSLAED 575
           RN+ L         +L+ + P++  KRK S  +D
Sbjct: 109 RNEHLMGLLRTFSQELKGKEPSSERKRKKSSKKD 142


>03_05_0882 +
           28467691-28467730,28468386-28468675,28469262-28469411,
           28470126-28470214,28470331-28470440,28470545-28470639,
           28471110-28471162,28471374-28471539,28471909-28472001,
           28472304-28472432,28472549-28472668,28472862-28472942,
           28473495-28473602,28473895-28474038,28474120-28474218,
           28474300-28474379,28474830-28474922,28475197-28475320
          Length = 687

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +3

Query: 423 DLEVFARHARRCKIQGEDVKLLVRRNKSLRSQLESRSPTAALKRKSSLAED 575
           +LE +   A   K Q   ++ L  RN+ L  Q+E +       ++ SLAED
Sbjct: 129 ELEEYRAEAAHLKNQQATIRRLEERNRQLEQQMEEKVREMVEMKQRSLAED 179


>09_06_0374 +
           22649455-22650024,22650085-22650637,22650812-22651147,
           22651171-22652605,22652939-22653062
          Length = 1005

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -1

Query: 134 PSIHSGCKQQPQSYVIDRLM*CALR 60
           PS+  GC  QP+  V++R + CALR
Sbjct: 129 PSVVGGCYFQPRGPVLNRYIPCALR 153


>12_02_0485 - 19559680-19560087,19560234-19560293
          Length = 155

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = -3

Query: 270 QKQTFRNKNNELHRIH 223
           Q+QTFR + NELHR++
Sbjct: 13  QEQTFRQQVNELHRVY 28


>09_02_0207 -
           5793848-5794276,5794523-5794645,5794742-5795250,
           5795543-5795648,5795798-5795959,5796094-5796144,
           5796229-5796394,5796624-5797093
          Length = 671

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 436 SQGMLDAAKSKGKMSSYW 489
           SQG+  AA+SKG M ++W
Sbjct: 345 SQGLSKAAESKGSMGAFW 362


>08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,
            4683834-4684204,4684290-4684835,4684927-4685027,
            4685117-4685933,4686025-4686213,4686313-4686384,
            4686477-4686587,4686647-4686652,4686694-4686794,
            4687714-4687813,4687891-4687986,4688157-4688273,
            4688367-4688492,4688566-4688619,4688745-4688992,
            4689087-4689195,4689284-4689583,4689799-4689963
          Length = 2240

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
 Frame = -1

Query: 230  VYMYTLCRYLHSFFKSAK---LIILSL---PNFNKLLRPSIHSGCKQQPQSYVIDRLM*C 69
            +Y YT C +    +K+ K   ++I  L   P +   L P     CK  P++Y + +L+  
Sbjct: 2075 MYAYTKCFFRVRDYKTVKSPPVLISPLDLGPKYADKLGPGFQEYCKTYPENYCLGQLIYW 2134

Query: 68   ALRNAQ 51
              +NA+
Sbjct: 2135 YSQNAE 2140


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,702,858
Number of Sequences: 37544
Number of extensions: 274992
Number of successful extensions: 627
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)