Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_P22
         (602 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   5.3  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   7.0  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    21   7.0  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    21   7.0  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   7.0  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   7.0  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    21   9.3  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    21   9.3  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 140 LRPSIHSGCKQQPQSYVIDR 81
           LR  + S CK  P  +V+DR
Sbjct: 284 LRMGVASFCKAFPWHFVVDR 303


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 155 NFNKLLRPSIHSGCKQQPQSYV 90
           N+N LLRP+   G  Q  QS +
Sbjct: 71  NWNTLLRPNFLDGWYQTLQSAI 92


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -1

Query: 161 LPNFNKLLRPSIHS 120
           L N+NKL+RP +++
Sbjct: 37  LSNYNKLVRPVVNT 50


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -1

Query: 161 LPNFNKLLRPSIHS 120
           L N+NKL+RP +++
Sbjct: 37  LSNYNKLVRPVVNT 50


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 155 NFNKLLRPSIHSGCKQQPQSYV 90
           N+N LLRP+   G  Q  QS +
Sbjct: 71  NWNTLLRPNFLDGWYQTLQSAI 92


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 155 NFNKLLRPSIHSGCKQQPQSYV 90
           N+N LLRP+   G  Q  QS +
Sbjct: 71  NWNTLLRPNFLDGWYQTLQSAI 92


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 155 NFNKLLRPSIHSGCKQQPQSYV 90
           N+N LLRP+   G  Q  Q+++
Sbjct: 27  NWNTLLRPNFLDGWYQTLQTHM 48


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 161 LPNFNKLLRPSIH 123
           L N+NKL+RP ++
Sbjct: 33  LSNYNKLVRPVVN 45


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,427
Number of Sequences: 438
Number of extensions: 2888
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)