Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_P21
         (476 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY162216-1|AAO11790.1|  504|Homo sapiens proton/amino acid trans...    35   0.13 
AK096251-1|BAC04737.1|  369|Homo sapiens protein ( Homo sapiens ...    35   0.13 
BC047374-1|AAH47374.1|  504|Homo sapiens solute carrier family 3...    34   0.22 
D83782-1|BAA12111.2| 1283|Homo sapiens KIAA0199 protein.               29   8.3  
BC027207-1|AAH27207.1|  352|Homo sapiens SCAP protein protein.         29   8.3  

>AY162216-1|AAO11790.1|  504|Homo sapiens proton/amino acid
           transporter 4 protein.
          Length = 504

 Score = 35.1 bits (77), Expect = 0.13
 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
 Frame = +2

Query: 14  KYHNITEXXXXXXXXXXXXXXXXTLPSLEQVIGLEGAFFYSFLGLIAPSILDLI-FKWER 190
           K+  I E                 +P L+ VI   GA   S L LI P +++++ F  E 
Sbjct: 385 KWKQICEFGIRSFLVSITCAGAILIPRLDIVISFVGAVSSSTLALILPPLVEILTFSKEH 444

Query: 191 GLGRNNWILFKDLFLIFFGCFVLVAGVTQSIREII 295
               N W++ K++ + F G    + G   ++ EII
Sbjct: 445 ---YNIWMVLKNISIAFTGVVGFLLGTYITVEEII 476


>AK096251-1|BAC04737.1|  369|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38932 fis, clone NT2NE2013217, moderately
           similar to Rattus norvegicus lysosomal amino acid
           transporter 1 mRNA. ).
          Length = 369

 Score = 35.1 bits (77), Expect = 0.13
 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
 Frame = +2

Query: 14  KYHNITEXXXXXXXXXXXXXXXXTLPSLEQVIGLEGAFFYSFLGLIAPSILDLI-FKWER 190
           K+  I E                 +P L+ VI   GA   S L LI P +++++ F  E 
Sbjct: 250 KWKQICEFGIRSFLVSITCAGAILIPRLDIVISFVGAVSSSTLALILPPLVEILTFSKEH 309

Query: 191 GLGRNNWILFKDLFLIFFGCFVLVAGVTQSIREII 295
               N W++ K++ + F G    + G   ++ EII
Sbjct: 310 ---YNIWMVLKNISIAFTGVVGFLLGTYITVEEII 341


>BC047374-1|AAH47374.1|  504|Homo sapiens solute carrier family 36
           (proton/amino acid symporter), member 4 protein.
          Length = 504

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
 Frame = +2

Query: 14  KYHNITEXXXXXXXXXXXXXXXXTLPSLEQVIGLEGAFFYSFLGLIAPSILDLI-FKWER 190
           K+  I E                 +P L+ VI   GA   S L +I P +++++ F  E 
Sbjct: 385 KWKQICEFGIRSFLVSITCAGAILIPRLDIVISFVGAVSSSTLAIILPPLVEILTFSKEH 444

Query: 191 GLGRNNWILFKDLFLIFFGCFVLVAGVTQSIREII 295
               N W++ K++ + F G    + G   ++ EII
Sbjct: 445 ---YNIWMVLKNISIAFTGVVGFLLGTYITVEEII 476


>D83782-1|BAA12111.2| 1283|Homo sapiens KIAA0199 protein.
          Length = 1283

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
 Frame = +2

Query: 89  PSLEQVIGLEGAFFYSFLGLIAPSILDLIFKWERGLGRNNWILFK----DLFLIFFGCFV 256
           P L  VIGLE     +   +  P  L++  +  +GL   +W + K    +L +I  G F 
Sbjct: 354 PYLVVVIGLENVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATELGIILIGYFT 413

Query: 257 LVAGVTQ 277
           LV  + +
Sbjct: 414 LVPAIQE 420


>BC027207-1|AAH27207.1|  352|Homo sapiens SCAP protein protein.
          Length = 352

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
 Frame = +2

Query: 89  PSLEQVIGLEGAFFYSFLGLIAPSILDLIFKWERGLGRNNWILFK----DLFLIFFGCFV 256
           P L  VIGLE     +   +  P  L++  +  +GL   +W + K    +L +I  G F 
Sbjct: 43  PYLVVVIGLENVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATELGIILIGYFT 102

Query: 257 LVAGVTQ 277
           LV  + +
Sbjct: 103 LVPAIQE 109


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,897,342
Number of Sequences: 237096
Number of extensions: 968235
Number of successful extensions: 1331
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1331
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4213781852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)