Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_P21
(476 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical pr... 35 0.026
Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical p... 35 0.026
AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein. 35 0.026
Z69883-3|CAA93741.2| 450|Caenorhabditis elegans Hypothetical pr... 34 0.061
AL132904-16|CAC35849.1| 340|Caenorhabditis elegans Hypothetical... 31 0.43
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 29 1.7
AF047658-3|ABC71828.1| 315|Caenorhabditis elegans Hypothetical ... 29 1.7
Z19152-7|CAA79539.2| 643|Caenorhabditis elegans Hypothetical pr... 29 2.3
AC006807-4|AAK84618.1| 904|Caenorhabditis elegans Hypothetical ... 28 4.0
U21854-1|AAA87454.1| 310|Caenorhabditis elegans cCAF1 protein p... 27 7.0
AL132860-28|CAB60501.1| 310|Caenorhabditis elegans Hypothetical... 27 7.0
AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical ... 27 7.0
AC006807-5|AAK84619.1| 349|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical
protein H32K16.1 protein.
Length = 481
Score = 35.1 bits (77), Expect = 0.026
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Frame = +2
Query: 86 LPSLEQVIGLEGAFFYSFLGLIAPSILDL-----IFKWERGLGRNNWILFKDLFLIFFGC 250
+P+L Q+I L G + LI PS LD +FK + + + L ++FL G
Sbjct: 403 VPNLMQIIPLVGITSGLLISLILPSFLDCMVFLPVFKKQGDMFKFYQKLIINVFLFVLGW 462
Query: 251 FVLVAGVTQSIREII 295
F L AG+ SI +II
Sbjct: 463 FFLGAGLYSSIDDII 477
>Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical
protein T20G5.6 protein.
Length = 486
Score = 35.1 bits (77), Expect = 0.026
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = +2
Query: 83 TLPSLEQVIGLEGAFFYSFLGLIAPSILDLIFKWERGLGRNNWILFKDLFLIFFGCFVLV 262
++P L +++GL G + L I P++ L K E+ L NN+ D +I GC V +
Sbjct: 411 SVPYLVELMGLVGNITGTMLSFIWPALFHLYIK-EKTL--NNFEKRFDQGIIIMGCSVCI 467
Query: 263 AGVTQSIREIIR 298
+GV S E++R
Sbjct: 468 SGVYFSSMELLR 479
>AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein.
Length = 486
Score = 35.1 bits (77), Expect = 0.026
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = +2
Query: 83 TLPSLEQVIGLEGAFFYSFLGLIAPSILDLIFKWERGLGRNNWILFKDLFLIFFGCFVLV 262
++P L +++GL G + L I P++ L K E+ L NN+ D +I GC V +
Sbjct: 411 SVPYLVELMGLVGNITGTMLSFIWPALFHLYIK-EKTL--NNFEKRFDQGIIIMGCSVCI 467
Query: 263 AGVTQSIREIIR 298
+GV S E++R
Sbjct: 468 SGVYFSSMELLR 479
>Z69883-3|CAA93741.2| 450|Caenorhabditis elegans Hypothetical
protein C27C12.4 protein.
Length = 450
Score = 33.9 bits (74), Expect = 0.061
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 7/55 (12%)
Frame = +2
Query: 125 FFYSFLGLIAPSILD-LIFKWERGLGRNNWI------LFKDLFLIFFGCFVLVAG 268
FF++F ++ PSI+ L KW + +G + ++ L+ +++L++FG VL AG
Sbjct: 59 FFFTFFNIVIPSIVQKLGAKWSQIIGASGYLFFMLTFLYLNVWLLYFGSAVLGAG 113
>AL132904-16|CAC35849.1| 340|Caenorhabditis elegans Hypothetical
protein Y111B2A.20 protein.
Length = 340
Score = 31.1 bits (67), Expect = 0.43
Identities = 21/77 (27%), Positives = 39/77 (50%)
Frame = +2
Query: 131 YSFLGLIAPSILDLIFKWERGLGRNNWILFKDLFLIFFGCFVLVAGVTQSIREIIRTSSQ 310
Y ++ +I + ++K ++G + F +L LIF + + G T SI++ I+ S Q
Sbjct: 149 YCYVLMIVVGVAMFLYKNKKGGAEDKDFGFGELLLIFS---LAMDGTTTSIQDRIKKSYQ 205
Query: 311 *VLLEATFYFNLFTN*Y 361
FY NL+++ Y
Sbjct: 206 RTGTSMMFYTNLYSSLY 222
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical protein
ZK688.5a protein.
Length = 1620
Score = 29.1 bits (62), Expect = 1.7
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = -3
Query: 333 KVASNSTY*ELVLIISLMLCVTPATSTKQPKNIRNKSLNKIQLFLPRPRSHLKMRSSMD 157
KV + + + ++VL S L T A+++ QP + SLN + PR R+H R D
Sbjct: 1515 KVRAGTDWNDIVLNESRQLLPTIASTSSQPST-SSSSLNTVSTNNPRKRNHDGSREDND 1572
>AF047658-3|ABC71828.1| 315|Caenorhabditis elegans Hypothetical
protein K03H6.4 protein.
Length = 315
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2
Query: 109 YNLFKTW*RRCRNHSKSGKNRXHDCFRDVMVFL 11
Y + W CR H GK DC R M+FL
Sbjct: 55 YVVVTIWNSACRLHMGEGKTTRADCIRRPMMFL 87
>Z19152-7|CAA79539.2| 643|Caenorhabditis elegans Hypothetical
protein B0464.6 protein.
Length = 643
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 321 NSTY*ELVLIISLMLCVTPATSTKQPKNIRNKSLNKIQLFLPRPRS 184
NS+ V+I SL++ + A K P ++ NK+Q PRP S
Sbjct: 98 NSSISLFVIIYSLIMIASYAFEIKFPNALKQLVYNKVQSKPPRPES 143
>AC006807-4|AAK84618.1| 904|Caenorhabditis elegans Hypothetical
protein Y58A7A.4 protein.
Length = 904
Score = 27.9 bits (59), Expect = 4.0
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = -2
Query: 181 LENEIQYGRGYETKEGVEESSF*AYNLF---KTW*RRCRNHSKSGKNRXHDCFRD 26
LE Y YE+ V++ YNLF + R H GK R H+ +D
Sbjct: 17 LEEMSNYAESYESDYEVDQQELHYYNLFEKPRGERRWLGKHHHGGKERLHNAVKD 71
>U21854-1|AAA87454.1| 310|Caenorhabditis elegans cCAF1 protein
protein.
Length = 310
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 120 ELSSTPSLVS*PRPYWISFSSG 185
EL +T L++ PR W++FSSG
Sbjct: 149 ELLTTSGLITDPRITWLTFSSG 170
>AL132860-28|CAB60501.1| 310|Caenorhabditis elegans Hypothetical
protein Y56A3A.20 protein.
Length = 310
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 120 ELSSTPSLVS*PRPYWISFSSG 185
EL +T L++ PR W++FSSG
Sbjct: 149 ELLTTSGLITDPRITWLTFSSG 170
>AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical
protein Y51F10.4 protein.
Length = 598
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 89 PSLEQVIGLEGAFFYSFLGLIAPSIL 166
P++E ++GL GAF S + I PS +
Sbjct: 380 PNVEFILGLTGAFIGSLVATILPSTI 405
>AC006807-5|AAK84619.1| 349|Caenorhabditis elegans Hypothetical
protein Y58A7A.5 protein.
Length = 349
Score = 26.6 bits (56), Expect = 9.2
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
Frame = -2
Query: 181 LENEIQYGRGYETKEGVEESSF*AYNLF---KTW*RRCRNHSKSGKNRXHDCFRD 26
LE Y YE+ V+ YNLF + R H GK R H+ +D
Sbjct: 54 LEEMSNYAESYESDYEVDPQELHYYNLFEKPRGERRWLGKHHHGGKERLHNAVKD 108
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,971,191
Number of Sequences: 27780
Number of extensions: 149996
Number of successful extensions: 334
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 334
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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