Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_P20
(639 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_01_0102 + 1582793-1582898,1582988-1583093,1584115-1584172,158... 31 0.58
08_02_1322 + 26131395-26131599,26132382-26132468,26133119-261333... 31 0.58
05_01_0545 - 4756266-4757510 31 0.77
02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,329... 30 1.3
12_01_0977 - 9900073-9900521,9900594-9900698,9900770-9900959,990... 30 1.8
03_01_0555 + 4132630-4132923,4133514-4133771,4134125-4134249,413... 30 1.8
05_01_0002 - 8097-8246,8384-8495,8572-8735,9367-9519,9603-9732,9... 29 3.1
02_01_0558 + 4109929-4110042,4110989-4111097,4111404-4111563,411... 29 4.1
10_08_1036 + 22470642-22470664,22470850-22471024,22471133-22473766 28 7.2
08_02_1528 + 27666356-27667081 28 7.2
07_03_1434 + 26529043-26529927,26530385-26530742,26530820-265310... 28 7.2
03_02_0415 - 8263459-8263611,8263788-8263919,8264841-8264936,826... 28 7.2
01_06_1329 + 36354340-36354493,36355781-36355942,36356279-363564... 28 7.2
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968... 27 9.5
08_02_0646 + 19676133-19677581 27 9.5
03_02_0080 + 5498638-5498699,5499121-5499190,5499551-5500711,550... 27 9.5
>09_01_0102 +
1582793-1582898,1582988-1583093,1584115-1584172,
1584676-1584745,1585132-1585197,1586374-1586429,
1587992-1588078,1588819-1589139,1589827-1589946,
1590747-1590881,1591529-1591605,1591681-1591756,
1592800-1592874,1592971-1593075,1593299-1593374,
1594482-1594617,1594702-1594804,1595186-1595298,
1596907-1597111,1597173-1597301,1597403-1597517,
1597710-1597795,1599108-1599203,1599615-1599751,
1600374-1600476,1601809-1601888,1602013-1602091,
1602241-1602298,1602489-1602586,1602673-1602767,
1602861-1602918
Length = 1074
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 373 RVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSK 537
R+C E+IA +E E D+E I+ ++ ++ N + D+ K K+V +
Sbjct: 649 RLCTSLGEKIAEMESEIADMERIISQRTRDMKKPNDKREDIELKIKNLKRKRVEE 703
>08_02_1322 +
26131395-26131599,26132382-26132468,26133119-26133372,
26133430-26133526,26133613-26133693,26133782-26133976,
26134093-26134182,26134296-26134471,26134565-26134687,
26134799-26134945,26135027-26135163,26135247-26135364,
26135462-26135518
Length = 588
Score = 31.5 bits (68), Expect = 0.58
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Frame = +1
Query: 325 CGKPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLR-- 498
C K +D N + R + Y + +A LE + D+ +K +EI N QV D++
Sbjct: 483 CTKVLELDSQNVKALYRRAQAYMQ-LADLELAEVDI-----KKALEIDPDNRQVLDVKLT 536
Query: 499 GKFVKPTLKKVSK-----YENKFAKLQKKAAE 579
K +K +K+ +K Y N FAK+ K+ AE
Sbjct: 537 YKNLKEKVKEYNKKDAKFYSNMFAKMTKQPAE 568
>05_01_0545 - 4756266-4757510
Length = 414
Score = 31.1 bits (67), Expect = 0.77
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 382 CKPS**YLRWRRQCS*VYRTSPR*CASFQ-QLYVPAP 275
C P+ Y R RQC+ Y P CA+FQ + +VP+P
Sbjct: 346 CLPNRPYQRTPRQCAAFYAAPPVDCAAFQCKPFVPSP 382
>02_01_0459 +
3298780-3298788,3298900-3299037,3299174-3299207,
3299528-3299531,3299814-3299949,3300034-3300090,
3301689-3301786,3301876-3301947,3302056-3302228,
3302552-3302698,3303113-3303336,3305300-3305306,
3305634-3305800,3306033-3306068,3306787-3307004,
3307115-3307172,3307761-3307842,3308045-3308207,
3308594-3308598,3308700-3308885,3308969-3309548,
3309642-3309774,3309880-3309948,3310184-3310395,
3310654-3310891,3311228-3311386,3311501-3311926,
3312010-3312447,3312593-3312712,3312784-3313266,
3313471-3314009,3314178-3314667,3314836-3314904,
3315735-3315839,3315940-3316158,3316254-3316508,
3316602-3316651,3317175-3317284,3317372-3317454,
3317560-3317772,3317870-3318040
Length = 2391
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +1
Query: 349 DANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKK 528
D ED K++ K + L D+K +E I+ K E+ ++S+VNDL + ++ +
Sbjct: 99 DEKEDHEKQL-KQIRLDMEALRDDKTQMEVILDEKIDEVRKISSKVNDLEVQ-LRREKDE 156
Query: 529 VSKYENKFAKLQKKAAEF 582
+ +K K K A F
Sbjct: 157 CHRMTSKMKKFIKAHARF 174
>12_01_0977 -
9900073-9900521,9900594-9900698,9900770-9900959,
9901035-9901093,9901297-9901688,9901770-9902059,
9902146-9903030
Length = 789
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/72 (23%), Positives = 35/72 (48%)
Frame = +1
Query: 370 KRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK 549
K+ K+ ERIA+L+D ++L K + ++ + Q+ LR + ++ S +
Sbjct: 580 KKTEKELRERIAQLQDSNYELSGSSKAQAARMAQMEKQIEALRKDKAELAAERDSALKEV 639
Query: 550 FAKLQKKAAEFN 585
+ K A+F+
Sbjct: 640 EDRKIKSQAQFD 651
>03_01_0555 +
4132630-4132923,4133514-4133771,4134125-4134249,
4134789-4134990,4135172-4135297,4135404-4135660,
4135968-4136075,4136142-4136310,4136378-4136543,
4136967-4136998,4137256-4137579,4137683-4137757,
4138093-4138162,4138228-4138385,4138872-4139021
Length = 837
Score = 29.9 bits (64), Expect = 1.8
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +1
Query: 361 DTIKRVCKDYHERIARLEDEKFDLEYIV-KRKDMEISDLNSQVNDLRGKFVKPTLKKVS- 534
+T ++C+ Y E A + KFDL YIV R + S V +R + TL+K S
Sbjct: 643 ETGPKICQKYIECPALFQGRKFDLRYIVFVRSICPLEIFLSDVFWVRLANNQYTLEKTSF 702
Query: 535 -KYENKFAKLQKKAAEFNFRNQLKVVKKKE 621
+YE F + N N + VK+ E
Sbjct: 703 FEYETHFT-VMNYIGRMNHMNTPEFVKEFE 731
>05_01_0002 -
8097-8246,8384-8495,8572-8735,9367-9519,9603-9732,
9802-9902,10016-10651,10820-10899,11014-11673,
11787-12041,12154-12281,12515-12669,12735-12919,
13020-13049,13164-13239,13371-13504,13703-13994,
14400-14567,14647-14745,14843-15014,15103-15281
Length = 1352
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/61 (22%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +1
Query: 340 NIDDANED-TIKRVCKD-YHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVK 513
++ +ED + K + K+ Y E + R ED++F+L+ +++ + I + + ++ +K
Sbjct: 468 SVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVIVAIKRVEELIEKMQDNSIK 527
Query: 514 P 516
P
Sbjct: 528 P 528
>02_01_0558 +
4109929-4110042,4110989-4111097,4111404-4111563,
4111721-4111796,4111984-4112109,4112233-4112484
Length = 278
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 394 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGK 504
+R+ R+ + KRK ++DL SQV+ LRG+
Sbjct: 124 KRVRRMVSNRESARRSRKRKQAHLADLESQVDQLRGE 160
>10_08_1036 + 22470642-22470664,22470850-22471024,22471133-22473766
Length = 943
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 430 LEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE 579
L+ +V RK+ E+ LN +V DLR + L K ++ A+ K AE
Sbjct: 602 LKDLVSRKEKEVLALNDEVTDLRLR-ETAALAKANELSKLLAEATAKKAE 650
>08_02_1528 + 27666356-27667081
Length = 241
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +1
Query: 376 VCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSK 537
+C E +++L+ +++ + KR+D + N Q K V+ KK+SK
Sbjct: 89 LCNSIQESVSKLKTSIQEMQLVHKRRDATVVQANIQYFIRLTKKVQKQSKKISK 142
>07_03_1434 +
26529043-26529927,26530385-26530742,26530820-26531007,
26531082-26531271,26531343-26531447,26531521-26531597,
26531628-26531972
Length = 715
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/67 (25%), Positives = 31/67 (46%)
Frame = +1
Query: 385 DYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQ 564
D +RIA L++ F+L K + +IS L Q+ L + ++ S + +
Sbjct: 520 DLRDRIAELQESNFELSGSSKVQAAKISQLEKQIQTLENDKAELARQRDSALKEVEDRKI 579
Query: 565 KKAAEFN 585
K A+F+
Sbjct: 580 KSQAQFD 586
>03_02_0415 -
8263459-8263611,8263788-8263919,8264841-8264936,
8265021-8265137,8265352-8265435,8265517-8265577,
8266217-8266266,8266544-8266633,8267539-8267757,
8269207-8269262,8269469-8269546,8269707-8269811,
8269925-8270069,8270310-8270388,8270470-8270537,
8271550-8271626,8272676-8272712,8273107-8273232,
8273770-8273805
Length = 602
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +1
Query: 379 CKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAK 558
C D I +LE+ K DL+ + ++ E S L + + + + K L + EN +
Sbjct: 385 CSDDETLIEKLENSKTDLQSKITKEAKENSILQASLERRKVELHKRRLALEKEVENLRDQ 444
Query: 559 LQKK 570
LQK+
Sbjct: 445 LQKE 448
>01_06_1329 +
36354340-36354493,36355781-36355942,36356279-36356457,
36356719-36356918,36356938-36357014,36357110-36357111,
36357594-36357701,36357806-36358024,36358167-36358448
Length = 460
Score = 27.9 bits (59), Expect = 7.2
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = +1
Query: 355 NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVS 534
N D +++ +D I +E ++ Y ++ E++D LRG VKP VS
Sbjct: 8 NYDVLEKCTEDILSLIKPVEGDRNKRIYAIQ----ELADTIYSAGALRGASVKPFGSFVS 63
Query: 535 KYENKFAKLQKKAAEFNFRNQLKVVKKKEFTL 630
+ K L FN N +KK+ TL
Sbjct: 64 QLYAKSGDLDVSVELFNALNLPISKRKKQDTL 95
>10_08_0043 -
14390398-14391531,14391850-14393691,14393800-14396825,
14397510-14397609
Length = 2033
Score = 27.5 bits (58), Expect = 9.5
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = +1
Query: 337 KNIDDANEDTIKRVCKDYH---ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKF 507
KN+ E+ + ++ ++ + + LE+ K DLE + I DLNS+ D
Sbjct: 519 KNLHSQLEEEVIKLTENLDRSTKELEELENAKLDLENTSRELKSTILDLNSE-KDAVLLQ 577
Query: 508 VKPTLKKVSKYENKFAKLQKKAAEFNFRNQL 600
+ +L K+S+ E + +K Q + + QL
Sbjct: 578 QQQSLAKISELELQLSKTQLELKNSEQKMQL 608
>08_02_0646 + 19676133-19677581
Length = 482
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 508 VKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKE 621
V P +KK K++KK + +NQ KVVK K+
Sbjct: 59 VPPPVKKAKGAAAAVGKIKKKVVGVDGKNQTKVVKGKK 96
>03_02_0080 +
5498638-5498699,5499121-5499190,5499551-5500711,
5500940-5501029,5501147-5501464
Length = 566
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 284 NVKLLKGGASSRRGAVNLRTLTTPT 358
N K KGGAS+ + A + RT T PT
Sbjct: 504 NGKAKKGGASTPKKAAHRRTTTVPT 528
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,244,647
Number of Sequences: 37544
Number of extensions: 185160
Number of successful extensions: 584
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -