Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_P18
         (693 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse t...    26   0.98 
AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease pr...    24   4.0  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   5.2  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   6.9  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   9.1  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   9.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   9.1  

>AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 134

 Score = 26.2 bits (55), Expect = 0.98
 Identities = 12/57 (21%), Positives = 28/57 (49%)
 Frame = -1

Query: 417 RTATRCFNWNLVLR*ARASNQVLAAVTRINQIIAVLISNECTLQNNQIGIAETIKAF 247
           R A   FN N++ +        L+   +++++   ++ N C  ++  + + +T KAF
Sbjct: 22  RMALHTFNNNIIPKSQFGFRPSLSTTHQLHRVTNNIVHNRCNRKSTGLALLDTEKAF 78


>AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease
           protein.
          Length = 375

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 440 HGQQHPPCAQQHGAS 396
           HGQ+H PC   +G +
Sbjct: 23  HGQEHKPCTTPNGTA 37


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/41 (24%), Positives = 16/41 (39%)
 Frame = -2

Query: 536  LHNLPPHSFSTRXXXXXXXXXXFYHQQVSWTFHGQQHPPCA 414
            + N P  S   R          +Y +  ++ + G  HP CA
Sbjct: 1621 IQNYPIESEYARYFFSVHPDFDYYERMFNYAYRGNYHPSCA 1661


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 461 QQVSWTFHGQQHPPCAQQH 405
           QQ   ++H QQHP  +Q H
Sbjct: 166 QQQPSSYHQQQHPGHSQHH 184


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 13/71 (18%), Positives = 27/71 (38%)
 Frame = +2

Query: 275 IWLFWRVHSLEISTAIIWFILVTAASTWLLALAYRNTKFQLKHXXXXXXXXXXXXXMSRK 454
           I+L  R H++ +     WF++   +   +L + YR      +              + +K
Sbjct: 245 IYLTARKHNIPLPNNPPWFVIFRVSEDDMLDVCYRIMALYKRGKPNAELLEEAVEALKKK 304

Query: 455 LADDKKMSRKE 487
             + +K  R E
Sbjct: 305 YQEQRKKDRPE 315


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +2

Query: 527  DYEATTYSIFYNNALFLTIVILSSFYILRTFTPTVNYI 640
            D+ ++ Y I YN  L       +S Y+   +   VNY+
Sbjct: 3113 DHYSSCYPIEYNGLLTTACAGTNSSYMYTPYIRPVNYL 3150


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +2

Query: 527  DYEATTYSIFYNNALFLTIVILSSFYILRTFTPTVNYI 640
            D+ ++ Y I YN  L       +S Y+   +   VNY+
Sbjct: 3116 DHYSSCYPIEYNGLLTTACAGTNSSYMYTPYIRPVNYL 3153


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 700,274
Number of Sequences: 2352
Number of extensions: 15030
Number of successful extensions: 32
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)