Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_P14
         (732 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.4  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   5.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   5.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   5.9  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 481 KTEKVRELSQMFKPGQYIAVSVVELAPGN 567
           KT   R  +Q+F+ GQ+ A+ V ++   N
Sbjct: 6   KTRVKRASNQLFRFGQFCAICVPKITSTN 34


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 403 CKLLGNVMACHISESYN 453
           C+ +GN   CH S+ Y+
Sbjct: 161 CEDIGNSHRCHCSDGYS 177


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 238 EGDDGYLSDEAQDYLKTHKL 297
           +  DG++ DE   + + HKL
Sbjct: 39  DSKDGHVIDEHDQFFRDHKL 58


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 238 EGDDGYLSDEAQDYLKTHKL 297
           +  DG++ DE   + + HKL
Sbjct: 39  DSKDGHVIDEHDQFFRDHKL 58


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 238 EGDDGYLSDEAQDYLKTHKL 297
           +  DG++ DE   + + HKL
Sbjct: 39  DSKDGHVIDEHDQFFRDHKL 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,855
Number of Sequences: 336
Number of extensions: 3059
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)