Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_P12
         (460 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   3.2  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   3.2  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   7.3  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   7.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    20   9.6  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    20   9.6  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 306 IIVLVFINMLKINKECHYI 362
           +I+  FIN+L   + CHY+
Sbjct: 184 VILPYFINLLMELQYCHYL 202


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 306 IIVLVFINMLKINKECHYI 362
           +I+  FIN+L   + CHY+
Sbjct: 184 VILPYFINLLMELQYCHYL 202


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -3

Query: 362 YIVTFFIYF*HIYKNQYNY 306
           YI  F +   +IY   Y+Y
Sbjct: 5   YIACFLLLLYYIYSKHYSY 23


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 9/24 (37%), Positives = 10/24 (41%)
 Frame = +1

Query: 109 NGRPYSNRCQLKCARATFAYAGPC 180
           NGRP  N  +LK          PC
Sbjct: 51  NGRPLPNHIRLKIVEMAANGIRPC 74


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 147 TFQLAPVAVRPAVGTTNR 94
           T+Q+ P  ++ AVG+ +R
Sbjct: 423 TYQVLPFGLKTAVGSFSR 440


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 201 GLPXVPYFPGRPVFYRLSLKCL 266
           G P +   P   VF R SL+C+
Sbjct: 179 GYPRLQRCPAMLVFDRRSLRCV 200


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,903
Number of Sequences: 336
Number of extensions: 1584
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)