Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_P12
         (460 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              32   0.003
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   1.2  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   2.8  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   4.8  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    21   6.4  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   6.4  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 31.9 bits (69), Expect = 0.003
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 76  CTAXSRPVCGXNGRPYSNRCQL 141
           C    RPVC  NG+ Y+N C+L
Sbjct: 110 CPRRHRPVCASNGKIYANHCEL 131


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -1

Query: 301 ERFEYGTESVPPRHFKL 251
           +RFEY T ++P  H+++
Sbjct: 252 QRFEYFTRTIPSDHYQV 268


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 273 TDSVPYSNRSIIIVLVFINML 335
           TD++ Y N + I+   FINML
Sbjct: 254 TDTIKYRNDNNIVRPDFINML 274


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 254 TKPIKYGTSREIR 216
           TKP+KYG  R  R
Sbjct: 144 TKPLKYGVKRTPR 156


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +1

Query: 70  CLCTAXSRPVCGXNGRPYSNRCQLKCARATFA 165
           C  +  ++ +   + + +SN  Q +CA  T+A
Sbjct: 22  CSYSCVNKSMLNSHLKSHSNVYQYRCANCTYA 53


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 47  ALWGLXVPVFAPPXLGLF 100
           A+W L   + +PP LG F
Sbjct: 162 AVWVLAGAITSPPLLGCF 179


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,175
Number of Sequences: 438
Number of extensions: 2049
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)