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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_P11
         (599 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41009-4|AAA82280.1|  404|Caenorhabditis elegans Hypothetical pr...   309   1e-84
U41009-2|AAA82279.1|  404|Caenorhabditis elegans Hypothetical pr...   309   1e-84
U56963-9|AAB38126.2|  404|Caenorhabditis elegans Temporarily ass...   305   2e-83
Z81485-1|CAB03975.1|  403|Caenorhabditis elegans Hypothetical pr...   294   3e-80
U41009-3|AAO44916.1|  353|Caenorhabditis elegans Hypothetical pr...   219   9e-58
U56963-10|AAM97949.1|  353|Caenorhabditis elegans Temporarily as...   215   2e-56
AL110479-10|CAD56249.1|  345|Caenorhabditis elegans Hypothetical...   171   3e-43
AL110479-11|CAB54357.1|  363|Caenorhabditis elegans Hypothetical...   167   4e-42
U41009-5|AAO44915.1|  173|Caenorhabditis elegans Hypothetical pr...   149   2e-36
U41009-7|AAN84884.1|   51|Caenorhabditis elegans Hypothetical pr...    80   1e-15
U41009-6|AAK68167.2|   84|Caenorhabditis elegans Hypothetical pr...    44   6e-05
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr...    32   0.27 
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr...    32   0.27 
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.      32   0.27 
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr...    29   1.9  
U49956-1|AAO38615.1|  669|Caenorhabditis elegans Hypothetical pr...    28   4.4  
AL132898-18|CAC14411.2|  417|Caenorhabditis elegans Hypothetical...    28   4.4  
U28991-14|AAA68388.1|  352|Caenorhabditis elegans Hypothetical p...    28   5.9  
U28991-13|AAA68387.1|  281|Caenorhabditis elegans Hypothetical p...    28   5.9  
AF016681-20|AAB66167.1|  370|Caenorhabditis elegans Hypothetical...    27   7.7  
AF000198-4|AAB53058.2|  175|Caenorhabditis elegans Hypothetical ...    27   7.7  

>U41009-4|AAA82280.1|  404|Caenorhabditis elegans Hypothetical
           protein C06E7.1a protein.
          Length = 404

 Score =  309 bits (758), Expect = 1e-84
 Identities = 140/186 (75%), Positives = 162/186 (87%)
 Frame = +3

Query: 42  FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 221
           FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6   FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65

Query: 222 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 401
           DYQ +VR  +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+
Sbjct: 66  DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125

Query: 402 MFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPXSKTQVTCEYVFAGGATVP 581
           MFGYATDETEE MPLT++L+HKLN+K+ ELRR+GE  W RP SKTQVT EY   GGA VP
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVP 185

Query: 582 QXVHTV 599
             VHTV
Sbjct: 186 LRVHTV 191


>U41009-2|AAA82279.1|  404|Caenorhabditis elegans Hypothetical
           protein C06E7.3a protein.
          Length = 404

 Score =  309 bits (758), Expect = 1e-84
 Identities = 140/186 (75%), Positives = 162/186 (87%)
 Frame = +3

Query: 42  FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 221
           FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6   FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65

Query: 222 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 401
           DYQ +VR  +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+
Sbjct: 66  DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125

Query: 402 MFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPXSKTQVTCEYVFAGGATVP 581
           MFGYATDETEE MPLT++L+HKLN+K+ ELRR+GE  W RP SKTQVT EY   GGA VP
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVP 185

Query: 582 QXVHTV 599
             VHTV
Sbjct: 186 LRVHTV 191


>U56963-9|AAB38126.2|  404|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 32, isoform a protein.
          Length = 404

 Score =  305 bits (748), Expect = 2e-83
 Identities = 140/186 (75%), Positives = 160/186 (86%)
 Frame = +3

Query: 42  FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 221
           FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6   FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65

Query: 222 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 401
           DYQ +VR  +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++  +VGAGDQG+
Sbjct: 66  DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDIADVGAGDQGI 125

Query: 402 MFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPXSKTQVTCEYVFAGGATVP 581
           MFGYATDETEE MPLT++L+HKLN K+ ELRR+GE  W RP SKTQVT EY   GGA VP
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQVTIEYSSEGGACVP 185

Query: 582 QXVHTV 599
             VHTV
Sbjct: 186 LRVHTV 191


>Z81485-1|CAB03975.1|  403|Caenorhabditis elegans Hypothetical
           protein C49F5.1 protein.
          Length = 403

 Score =  294 bits (722), Expect = 3e-80
 Identities = 134/188 (71%), Positives = 160/188 (85%)
 Frame = +3

Query: 36  SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKA 215
           S FLFTSESV EGHPDKMCDQISDA+LDAHL QDP+AKVACET+TKTGMV+LCGEITSKA
Sbjct: 3   SKFLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKTGMVMLCGEITSKA 62

Query: 216 NVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQ 395
            VDYQ +VR  ++ IG+ DSS GFD+KTC+V++AL+QQSP IAAGVH N++ E+VGAGDQ
Sbjct: 63  VVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGVHVNKDGEDVGAGDQ 122

Query: 396 GLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPXSKTQVTCEYVFAGGAT 575
           G+MFGYATDETEE MPLT++L+HK+N ++ +LRRNG   W RP SK+QVT EY    GAT
Sbjct: 123 GIMFGYATDETEETMPLTLILSHKINAELHKLRRNGTLPWVRPDSKSQVTIEYESRHGAT 182

Query: 576 VPQXVHTV 599
           +P  VHTV
Sbjct: 183 IPLRVHTV 190


>U41009-3|AAO44916.1|  353|Caenorhabditis elegans Hypothetical
           protein C06E7.3b protein.
          Length = 353

 Score =  219 bits (536), Expect = 9e-58
 Identities = 99/140 (70%), Positives = 119/140 (85%)
 Frame = +3

Query: 180 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 359
           M++LCGEITSKA VDYQ +VR  +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH 
Sbjct: 1   MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60

Query: 360 NRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPXSKTQ 539
           +++ ++VGAGDQG+MFGYATDETEE MPLT++L+HKLN+K+ ELRR+GE  W RP SKTQ
Sbjct: 61  DKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQ 120

Query: 540 VTCEYVFAGGATVPQXVHTV 599
           VT EY   GGA VP  VHTV
Sbjct: 121 VTIEYASEGGACVPLRVHTV 140


>U56963-10|AAM97949.1|  353|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 32, isoform b protein.
          Length = 353

 Score =  215 bits (526), Expect = 2e-56
 Identities = 99/140 (70%), Positives = 117/140 (83%)
 Frame = +3

Query: 180 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 359
           M++LCGEITSKA VDYQ +VR  +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH 
Sbjct: 1   MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60

Query: 360 NRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPXSKTQ 539
           +++  +VGAGDQG+MFGYATDETEE MPLT++L+HKLN K+ ELRR+GE  W RP SKTQ
Sbjct: 61  DKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQ 120

Query: 540 VTCEYVFAGGATVPQXVHTV 599
           VT EY   GGA VP  VHTV
Sbjct: 121 VTIEYSSEGGACVPLRVHTV 140


>AL110479-10|CAD56249.1|  345|Caenorhabditis elegans Hypothetical
           protein Y105C5B.12a protein.
          Length = 345

 Score =  171 bits (416), Expect = 3e-43
 Identities = 76/113 (67%), Positives = 93/113 (82%)
 Frame = +3

Query: 261 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDETEECM 440
           GY D   GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDETEE M
Sbjct: 20  GYFDYRNGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAM 79

Query: 441 PLTVVLAHKLNQKIAELRRNGEFWWARPXSKTQVTCEYVFAGGATVPQXVHTV 599
           PLT++L+HKLN+K+ ELRR+GE  W RP SKTQVT EY   GGA +P  VHTV
Sbjct: 80  PLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACIPLRVHTV 132


>AL110479-11|CAB54357.1|  363|Caenorhabditis elegans Hypothetical
           protein Y105C5B.12b protein.
          Length = 363

 Score =  167 bits (407), Expect = 4e-42
 Identities = 76/118 (64%), Positives = 95/118 (80%), Gaps = 3/118 (2%)
 Frame = +3

Query: 255 HIGYDDSSK---GFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDE 425
           H+  D  +K   GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDE
Sbjct: 33  HLAQDPHAKVACGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDE 92

Query: 426 TEECMPLTVVLAHKLNQKIAELRRNGEFWWARPXSKTQVTCEYVFAGGATVPQXVHTV 599
           TEE MPLT++L+HKLN+K+ ELRR+GE  W RP SKTQVT EY   GGA +P  VHTV
Sbjct: 93  TEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACIPLRVHTV 150



 Score = 83.0 bits (196), Expect = 1e-16
 Identities = 47/86 (54%), Positives = 53/86 (61%)
 Frame = +3

Query: 42  FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 221
           FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVAC    KT  VL+  E  S    
Sbjct: 6   FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACGFDYKTCNVLVALEQQSPEIA 65

Query: 222 DYQKVVRETVKHIGYDDSSKGFDYKT 299
               V +++   +G  D    F Y T
Sbjct: 66  AGVHVDKDS-DDVGAGDQGIMFGYAT 90


>U41009-5|AAO44915.1|  173|Caenorhabditis elegans Hypothetical
           protein C06E7.1d protein.
          Length = 173

 Score =  149 bits (360), Expect = 2e-36
 Identities = 67/81 (82%), Positives = 73/81 (90%)
 Frame = +3

Query: 42  FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 221
           FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6   FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65

Query: 222 DYQKVVRETVKHIGYDDSSKG 284
           DYQ +VR  +K IGYDDSSKG
Sbjct: 66  DYQVLVRNVIKKIGYDDSSKG 86



 Score = 30.3 bits (65), Expect = 1.1
 Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
 Frame = +1

Query: 220 WIIKKLCAKRSNILVMMIRPKAL----ITRHAV*CSH*TNNHQTLLLGCMRTEMTRKLGQ 387
           W+I  LC + S+ L ++I+        ITRHA+   H  NNH   LL    T +      
Sbjct: 97  WLIT-LC-QESHFLGLLIKYSIQFQDSITRHAMFLLHSNNNHLKSLLESTWTRIVTMSEP 154

Query: 388 ETRA*CSVMQQMRQKNAC 441
           E +  C  M  M+ K  C
Sbjct: 155 EIKELCLDMLLMKPKKRC 172


>U41009-7|AAN84884.1|   51|Caenorhabditis elegans Hypothetical
           protein C06E7.1c protein.
          Length = 51

 Score = 79.8 bits (188), Expect = 1e-15
 Identities = 35/39 (89%), Positives = 36/39 (92%)
 Frame = +3

Query: 42  FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVAC 158
           FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVAC
Sbjct: 6   FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVAC 44


>U41009-6|AAK68167.2|   84|Caenorhabditis elegans Hypothetical
          protein C06E7.1b protein.
          Length = 84

 Score = 44.4 bits (100), Expect = 6e-05
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = +3

Query: 42 FLFTSESVGEGHPDKMCDQ 98
          FLFTSESV EGHPDKMCDQ
Sbjct: 6  FLFTSESVSEGHPDKMCDQ 24


>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
           protein T14G8.1 protein.
          Length = 1787

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +3

Query: 108 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 248
           A +D ++ Q P+   +C    + G  VL+  E  +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337


>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
           protein T14G8.1 protein.
          Length = 1787

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +3

Query: 108 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 248
           A +D ++ Q P+   +C    + G  VL+  E  +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337


>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
          Length = 1787

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +3

Query: 108 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 248
           A +D ++ Q P+   +C    + G  VL+  E  +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337


>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
           protein F15B9.4 protein.
          Length = 1140

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +3

Query: 264 YDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDE-TEECM 440
           +DD+S+  +  T  +    DQQ  N    +       ++GA   GL    +++  T++  
Sbjct: 225 HDDNSQPIEILTRILSKTSDQQWENFIGLLETIEKSTDIGASISGLRVSCSSNVLTKDSE 284

Query: 441 PLTVVLAHKLNQKIAELRRN 500
             T V+  KLN++  E  RN
Sbjct: 285 TQTDVVQRKLNKERREPSRN 304


>U49956-1|AAO38615.1|  669|Caenorhabditis elegans Hypothetical
           protein M03A1.3 protein.
          Length = 669

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 16/64 (25%), Positives = 30/64 (46%)
 Frame = +3

Query: 162 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNI 341
           T+T+TG  L        + +    ++++  K +  D ++K  D KTC   L +DQ   N+
Sbjct: 37  TLTRTGDSLNLRIYDENSAIRKVHILQKEGKDVLVDCTNKKEDGKTCEAQLTVDQFEKNL 96

Query: 342 AAGV 353
              +
Sbjct: 97  PISI 100


>AL132898-18|CAC14411.2|  417|Caenorhabditis elegans Hypothetical
           protein Y59A8B.13 protein.
          Length = 417

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = +1

Query: 208 PKLTWIIKKLCAKRSNIL---VMMIRPKALITRH 300
           PK+ W ++K+C K+ +I     + I P+ L+T H
Sbjct: 253 PKIVWHLEKMCNKKEDISRGNPVSIPPQRLLTHH 286


>U28991-14|AAA68388.1|  352|Caenorhabditis elegans Hypothetical
           protein F08F8.1 protein.
          Length = 352

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 15/41 (36%), Positives = 16/41 (39%)
 Frame = -1

Query: 281 FGRIIITNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGF 159
           FGR       D    NF   H  FG       HH GF +GF
Sbjct: 149 FGRPFGRRGMDHHGFNFHRHHHPFGAFHGFGGHHHGFGHGF 189


>U28991-13|AAA68387.1|  281|Caenorhabditis elegans Hypothetical
           protein F08F8.5 protein.
          Length = 281

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 15/41 (36%), Positives = 16/41 (39%)
 Frame = -1

Query: 281 FGRIIITNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGF 159
           FGR       D    NF   H  FG       HH GF +GF
Sbjct: 223 FGRPFGRRGMDHHGFNFHRHHHPFGAFHGFGGHHHGFGHGF 263


>AF016681-20|AAB66167.1|  370|Caenorhabditis elegans Hypothetical
           protein F22E5.1 protein.
          Length = 370

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +1

Query: 172 KPVWCFCVAKSHPKLTWIIKKLCAKRSNILVMMIRPKALITR 297
           KP+    + K HP + W+   L  K+ N++ +M++  A  T+
Sbjct: 197 KPLLLAELLKEHPNIWWMDAHLSVKKPNMVELMMKEVAEKTK 238


>AF000198-4|AAB53058.2|  175|Caenorhabditis elegans Hypothetical
           protein T28F2.2 protein.
          Length = 175

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +1

Query: 217 TWIIKKLCAKRSNILVMMIRPKALITRHAV*CSH 318
           +W+++++C   SN+ V+  +       H V C H
Sbjct: 5   SWLLEEICTNFSNLTVLKFKELCNRASHLVLCGH 38


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,688,880
Number of Sequences: 27780
Number of extensions: 354253
Number of successful extensions: 987
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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