Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_P11
(599 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 23 2.3
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 23 2.3
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 23 3.0
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 23 3.0
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 22 5.3
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 21 7.0
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 21 7.0
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 9.2
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 9.2
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 9.2
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 9.2
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 21 9.2
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 23.0 bits (47), Expect = 2.3
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +1
Query: 496 EMENFGGQDXIQKHRLLANMYLL 564
++ ++ G++ + H+LL N Y L
Sbjct: 250 DLPDYRGEEYLYSHKLLLNRYYL 272
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 23.0 bits (47), Expect = 2.3
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +1
Query: 496 EMENFGGQDXIQKHRLLANMYLL 564
++ ++ G++ + H+LL N Y L
Sbjct: 250 DLPDYRGEEYLYSHKLLLNRYYL 272
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 22.6 bits (46), Expect = 3.0
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 449 CSACTQTQSENCRAQAKW 502
C CT+ Q +N A+W
Sbjct: 75 CKKCTEIQKQNLDKLAEW 92
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 22.6 bits (46), Expect = 3.0
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 449 CSACTQTQSENCRAQAKW 502
C CT+ Q +N A+W
Sbjct: 75 CKKCTEIQKQNLDKLAEW 92
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -2
Query: 409 PNIKPWSPAPTSSSFLFSCTPAAMFGDCWSSASITLH 299
PN++P S +++ P M D W+S + LH
Sbjct: 57 PNVRPISSHQIANNVTMQLLPKLMEFDDWTSV-MELH 92
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 21.4 bits (43), Expect = 7.0
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +3
Query: 510 WWARPXSKTQVT 545
WW+RP Q T
Sbjct: 45 WWSRPREPAQTT 56
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.4 bits (43), Expect = 7.0
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 32 WISIFVHIGICWRGSSRQNVRPNKRR 109
W+ + V +GI +G + VR N R
Sbjct: 4 WLLLVVCLGIACQGITSVTVRENSPR 29
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/24 (29%), Positives = 12/24 (50%)
Frame = -1
Query: 290 IKAFGRIIITNMFDRFAHNFLIIH 219
+K RI + +D F H ++H
Sbjct: 510 VKGMVRIFLGPKYDEFGHEVDLVH 533
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +1
Query: 403 CSVMQQMRQKNACR 444
C + Q R+KN CR
Sbjct: 389 CELHMQPRKKNCCR 402
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +1
Query: 403 CSVMQQMRQKNACR 444
C + Q R+KN CR
Sbjct: 389 CELHMQPRKKNCCR 402
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/24 (29%), Positives = 12/24 (50%)
Frame = -1
Query: 290 IKAFGRIIITNMFDRFAHNFLIIH 219
+K RI + +D F H ++H
Sbjct: 510 VKGMVRIFLGPKYDEFGHEVDLVH 533
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/24 (29%), Positives = 12/24 (50%)
Frame = -1
Query: 290 IKAFGRIIITNMFDRFAHNFLIIH 219
+K RI + +D F H ++H
Sbjct: 136 VKGMVRIFLGPKYDEFGHEVDLVH 159
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,078
Number of Sequences: 438
Number of extensions: 3903
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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