Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_P11
(599 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g17390.1 68416.m02222 S-adenosylmethionine synthetase, putati... 248 3e-66
At4g01850.1 68417.m00242 S-adenosylmethionine synthetase 2 (SAM2... 240 6e-64
At1g02500.2 68414.m00201 S-adenosylmethionine synthetase 1 (SAM1... 239 8e-64
At1g02500.1 68414.m00200 S-adenosylmethionine synthetase 1 (SAM1... 239 8e-64
At2g36880.1 68415.m04521 S-adenosylmethionine synthetase, putati... 238 2e-63
At3g46800.1 68416.m05080 DC1 domain-containing protein contains ... 28 4.1
At2g03270.1 68415.m00280 DNA-binding protein, putative similar t... 28 4.1
At3g43300.1 68416.m04570 guanine nucleotide exchange family prot... 28 5.4
At1g54960.1 68414.m06277 NPK1-related protein kinase, putative (... 28 5.4
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 27 7.2
At1g05055.1 68414.m00506 basic transcription factor 2, 44kD subu... 27 7.2
At5g50100.1 68418.m06204 expressed protein contains Pfam domain ... 27 9.5
At4g38660.1 68417.m05473 thaumatin, putative similar to thaumati... 27 9.5
>At3g17390.1 68416.m02222 S-adenosylmethionine synthetase, putative
similar to S-adenosylmethionine synthetase 2 (Methionine
adenosyltransferase 2, AdoMet synthetase 2)
[Catharanthus roseus] SWISS-PROT:Q96552
Length = 393
Score = 248 bits (606), Expect = 3e-66
Identities = 119/188 (63%), Positives = 143/188 (76%), Gaps = 2/188 (1%)
Frame = +3
Query: 42 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 221
FLFTSESV EGHPDK+CDQISDAILDA L QDP++KVACET TKT MV++ GEIT+KANV
Sbjct: 4 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKANV 63
Query: 222 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN--RNDEEVGAGDQ 395
DY+++VR+T + IG+ + G D C V++ ++QQSP+IA GVH + + EEVGAGDQ
Sbjct: 64 DYEQIVRKTCREIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEVGAGDQ 123
Query: 396 GLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPXSKTQVTCEYVFAGGAT 575
G MFGYATDET E MPLT VLA KL K+ E+R+NG W RP KTQVT EY+ GA
Sbjct: 124 GHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTIEYINESGAM 183
Query: 576 VPQXVHTV 599
VP VHTV
Sbjct: 184 VPVRVHTV 191
>At4g01850.1 68417.m00242 S-adenosylmethionine synthetase 2 (SAM2)
identical to S-adenosylmethionine synthetase 2
(Methionine adenosyltransferase 2, AdoMet synthetase 2)
[Arabidopsis thaliana] SWISS-PROT:P17562
Length = 393
Score = 240 bits (587), Expect = 6e-64
Identities = 113/188 (60%), Positives = 140/188 (74%), Gaps = 2/188 (1%)
Frame = +3
Query: 42 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 221
FLFTSESV EGHPDK+CDQISDA+LDA L QDPD+KVACET TKT MV++ GEIT+KA +
Sbjct: 4 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATI 63
Query: 222 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN--RNDEEVGAGDQ 395
DY+K+VR+T + IG+ G D C V++ ++QQSP+IA GVH + + E++GAGDQ
Sbjct: 64 DYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQ 123
Query: 396 GLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPXSKTQVTCEYVFAGGAT 575
G MFGYATDET E MPL+ VLA K+ ++ E+R+NG W RP KTQVT EY GA
Sbjct: 124 GHMFGYATDETPELMPLSHVLATKIGARLTEVRKNGTCRWLRPDGKTQVTVEYYNDNGAM 183
Query: 576 VPQXVHTV 599
VP VHTV
Sbjct: 184 VPVRVHTV 191
>At1g02500.2 68414.m00201 S-adenosylmethionine synthetase 1 (SAM1)
identical to S-adenosylmethionine synthetase 1
(Methionine adenosyltransferase 1, AdoMet synthetase 1)
[Arabidopsis thaliana] SWISS-PROT:P23686
Length = 393
Score = 239 bits (586), Expect = 8e-64
Identities = 116/188 (61%), Positives = 140/188 (74%), Gaps = 2/188 (1%)
Frame = +3
Query: 42 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 221
FLFTSESV EGHPDK+CDQISDA+LDA L QDPD+KVACET TKT MV++ GEIT+KA V
Sbjct: 4 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATV 63
Query: 222 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN--RNDEEVGAGDQ 395
DY+K+VR+T + IG+ G D C V++ ++QQSP+IA GVH + + EE+GAGDQ
Sbjct: 64 DYEKIVRDTCRAIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKCPEEIGAGDQ 123
Query: 396 GLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPXSKTQVTCEYVFAGGAT 575
G MFGYATDET E MPL+ VLA KL ++ E+R+NG W RP KTQVT EY GA
Sbjct: 124 GHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNDKGAM 183
Query: 576 VPQXVHTV 599
VP VHTV
Sbjct: 184 VPIRVHTV 191
>At1g02500.1 68414.m00200 S-adenosylmethionine synthetase 1 (SAM1)
identical to S-adenosylmethionine synthetase 1
(Methionine adenosyltransferase 1, AdoMet synthetase 1)
[Arabidopsis thaliana] SWISS-PROT:P23686
Length = 393
Score = 239 bits (586), Expect = 8e-64
Identities = 116/188 (61%), Positives = 140/188 (74%), Gaps = 2/188 (1%)
Frame = +3
Query: 42 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 221
FLFTSESV EGHPDK+CDQISDA+LDA L QDPD+KVACET TKT MV++ GEIT+KA V
Sbjct: 4 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATV 63
Query: 222 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN--RNDEEVGAGDQ 395
DY+K+VR+T + IG+ G D C V++ ++QQSP+IA GVH + + EE+GAGDQ
Sbjct: 64 DYEKIVRDTCRAIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKCPEEIGAGDQ 123
Query: 396 GLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPXSKTQVTCEYVFAGGAT 575
G MFGYATDET E MPL+ VLA KL ++ E+R+NG W RP KTQVT EY GA
Sbjct: 124 GHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNDKGAM 183
Query: 576 VPQXVHTV 599
VP VHTV
Sbjct: 184 VPIRVHTV 191
>At2g36880.1 68415.m04521 S-adenosylmethionine synthetase, putative
similar to S-adenosylmethionine synthetase 3 (Methionine
adenosyltransferase 3, AdoMet synthetase 3)
[Lycopersicon esculentum] SWISS-PROT:P43282
Length = 390
Score = 238 bits (583), Expect = 2e-63
Identities = 115/188 (61%), Positives = 140/188 (74%), Gaps = 2/188 (1%)
Frame = +3
Query: 42 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 221
FLFTSESV EGHPDK+CDQISDAILDA L QDP++KVACET TKT MV++ GEIT+ A V
Sbjct: 4 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTAAKV 63
Query: 222 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN--RNDEEVGAGDQ 395
DY+K+VR T + IG+ + G D C+V++ ++QQSP+IA GVH + + E++GAGDQ
Sbjct: 64 DYEKIVRSTCREIGFISADVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKKPEDIGAGDQ 123
Query: 396 GLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPXSKTQVTCEYVFAGGAT 575
G MFGYATDET E MPLT VLA KL K+ E+R+N W RP KTQVT EY GGA
Sbjct: 124 GHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDGGAM 183
Query: 576 VPQXVHTV 599
+P VHTV
Sbjct: 184 IPIRVHTV 191
>At3g46800.1 68416.m05080 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 682
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -1
Query: 494 PELCNFLIEFVCKHYSQRHAFFCLICCITEHQALVSCPNFLVIS 363
P L NF C R +FCL C H+A + P + I+
Sbjct: 267 PRLVNFTCN-ACGTAGDRSPYFCLQCNFMIHRACIDLPRVININ 309
>At2g03270.1 68415.m00280 DNA-binding protein, putative similar to
Swiss-Prot:Q60560 DNA-binding protein SMUBP-2
(Immunoglobulin MU binding protein 2) (SMUBP-2) (Insulin
II gene enhancer-binding protein)(RIPE3B-binding complex
3B2 P110 subunit) (RIP-1)[Mesocricetus auratus];
identical to putative helicase (atpc-2 gene) cDNA
NCBI_gi:11191230
Length = 639
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/70 (18%), Positives = 40/70 (57%)
Frame = +3
Query: 72 GHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETV 251
GHP ++ Q+ D+ LDA + + ++ +A + + M L G++ + + ++++++ +
Sbjct: 264 GHPARLLPQVLDSALDAQVLKGDNSGLAND--IRKEMKALNGKLLKAKDKNTRRLIQKEL 321
Query: 252 KHIGYDDSSK 281
+ +G ++ +
Sbjct: 322 RTLGKEERKR 331
>At3g43300.1 68416.m04570 guanine nucleotide exchange family protein
similar to SP|Q9Y6D5 Brefeldin A-inhibited guanine
nucleotide-exchange protein 2 {Homo sapiens}; contains
Pfam profile PF01369: Sec7 domain
Length = 1756
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +3
Query: 135 DPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRE---TVKHIGYDDSSKGFDYKTCS 305
DP+ +A +T + G L C K+ VD++K+ RE + ++ D +S G +T S
Sbjct: 523 DPNPAMASQTASVKGSSLQCLVNVLKSLVDWEKIRREAENSTRNANEDSASTGEPIETKS 582
>At1g54960.1 68414.m06277 NPK1-related protein kinase, putative
(ANP2) similar to protein kinase [Nicotiana tabacum]
gi|456309|dbj|BAA05648; identical to cDNA NPK1-related
protein kinase 2, partial cds GI:2342424
Length = 596
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +3
Query: 126 LNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDD 272
L+ + DAK +C+T+++ +L C + N + + V V H Y +
Sbjct: 431 LDNNTDAKKSCDTMSEISDILKCKFDENSGNGETETKVSMEVDHPSYSE 479
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = -2
Query: 490 SSAIF*LSLCASTTVNGMHSSVSSV--A*PNIKPWSPAPTSSSFLFSCTPAAMFGDCWSS 317
+S++F S A+T+ + + + SS A P+ S AP SSS +F T ++ SS
Sbjct: 203 NSSLFGASSSAATSTSPLFGAPSSATGATPSFSVASSAPGSSSSIFGATGSSPSFSVASS 262
Query: 316 AS 311
AS
Sbjct: 263 AS 264
>At1g05055.1 68414.m00506 basic transcription factor 2, 44kD
subunit-related contains weak similarity to
Swiss-Prot:Q13888 TFIIH basal transcription factor
complex p44 subunit (Basic transcription factor 2 44 kDa
subunit, BTF2-p44, General transcription factor IIH
polypeptide 2) [Homo sapiens]
Length = 421
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 461 CKHYSQRHAFFCLICCITEHQALVSCP 381
CKHY FCL C I H++L +CP
Sbjct: 385 CKHY------FCLDCDIYIHESLHNCP 405
>At5g50100.1 68418.m06204 expressed protein contains Pfam domain
PF04134: Protein of unknown function, DUF393
Length = 214
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 270 DSSKGFDYKTCSVMLALDQQSPNIAAGVHE-NRNDEEVGAG 389
+ ++G DYKT + Q N+ GV R EEVG G
Sbjct: 116 EDNQGLDYKTVMGQIHAIQSDGNVVKGVEAFRRLYEEVGLG 156
>At4g38660.1 68417.m05473 thaumatin, putative similar to
thaumatin-like protein [Arabidopsis thaliana]
GI:2435406, thaumatin-like protein precursor [Pyrus
pyrifolia] GI:3241854; contains Pfam profile PF00314:
Thaumatin family
Length = 345
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 184 TIPVLVMVSHATFASGS*FRCASRIASLIWSHILSG*PSPT 62
T+ V++ +T + GS F A+R +W ILS SPT
Sbjct: 14 TLSFTVLLLASTGSYGSTFTFANRCGYTVWPGILSNAGSPT 54
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,625,285
Number of Sequences: 28952
Number of extensions: 321181
Number of successful extensions: 895
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1187288784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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