Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_P09
         (449 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   0.88 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   0.88 
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    21   6.2  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    21   6.2  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    21   8.2  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 0.88
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 135 ISPANVRSNDXLWRREHSDQSLXILGDL 52
           I    + +ND  W   +S++ L ILG++
Sbjct: 338 IDSGYILNNDGKWHNIYSEKGLNILGNI 365


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 0.88
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 135 ISPANVRSNDXLWRREHSDQSLXILGDL 52
           I    + +ND  W   +S++ L ILG++
Sbjct: 338 IDSGYILNNDGKWHNIYSEKGLNILGNI 365


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 209 ACIFKKLVLFDTNIL 165
           AC+F+KL   D N L
Sbjct: 57  ACVFQKLHFMDGNTL 71


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 209 ACIFKKLVLFDTNIL 165
           AC+F+KL   D N L
Sbjct: 57  ACVFQKLHFMDGNTL 71


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 63  LGDLEMTTGMAKLLXRLRQDD 1
           L DLEM T +  +L   +QD+
Sbjct: 509 LEDLEMGTPLENILESCQQDE 529


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,004
Number of Sequences: 438
Number of extensions: 1370
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)