Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_P08
         (736 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095189-1|AAM12282.1|  201|Drosophila melanogaster LD26817p pro...   132   6e-31
AE014296-1249|AAN12062.1|  201|Drosophila melanogaster CG8580-PB...   132   6e-31
AE014296-1248|AAF50569.1|  201|Drosophila melanogaster CG8580-PA...   132   6e-31
AE014134-2885|AAF53636.3| 1912|Drosophila melanogaster CG7527-PA...    52   1e-06
AE014296-1208|AAF50601.2| 1770|Drosophila melanogaster CG32387-P...    32   0.70 
AE013599-3678|AAF47055.3|  181|Drosophila melanogaster CG13560-P...    32   0.93 
BT006015-1|AAO74698.1|  553|Drosophila melanogaster HL01040p pro...    31   2.2  
AE014297-130|AAF52106.1|  553|Drosophila melanogaster CG12001-PA...    31   2.2  
AY118274-1|AAM48303.1| 1443|Drosophila melanogaster AT03867p pro...    29   6.6  
AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1 pr...    29   6.6  
AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB ...    29   6.6  
AE014298-3022|AAF50904.2|  762|Drosophila melanogaster CG1676-PA...    29   8.7  

>AY095189-1|AAM12282.1|  201|Drosophila melanogaster LD26817p
           protein.
          Length = 201

 Score =  132 bits (318), Expect = 6e-31
 Identities = 84/191 (43%), Positives = 109/191 (57%), Gaps = 25/191 (13%)
 Frame = +3

Query: 237 MACATLKRNLDWESKAQLPTKRRRCSPFAAS-------------PSTSPGLKTSES---- 365
           MACATLKR LDWES  Q P KRRRC+PF  +             PSTS GL  + S    
Sbjct: 1   MACATLKRALDWESMNQRPPKRRRCNPFGQAGSNAGPASPSRDGPSTSAGLPHTPSNRFA 60

Query: 366 ----KPSSFGESVSAPVKITPERMAQEIYDEIKRLHRRGQLRLANXXXXXXXXXXXXXXX 533
               +PS F ES  A  K++P++MA+ + +EIKRLH+R QL + +               
Sbjct: 61  KDSTEPSPFSESSLA--KMSPDKMAESLCNEIKRLHKRKQLPITSSALERMQDSESSGSE 118

Query: 534 XXPPH-QSAHGPQ---RARTRALFTFKQVRMICERMLHDQEVALRAEYESVLSTKLAEQY 701
             P   +    PQ   R   +ALFTFKQV++ICE M+ ++E  LR  YESVL+TKLAEQY
Sbjct: 119 MGPESPRRPDSPQNLMRHGEKALFTFKQVQLICESMIKERENQLRERYESVLTTKLAEQY 178

Query: 702 EAFVRFNLXQV 734
           +AFV+F   Q+
Sbjct: 179 DAFVKFTYDQI 189


>AE014296-1249|AAN12062.1|  201|Drosophila melanogaster CG8580-PB,
           isoform B protein.
          Length = 201

 Score =  132 bits (318), Expect = 6e-31
 Identities = 84/191 (43%), Positives = 109/191 (57%), Gaps = 25/191 (13%)
 Frame = +3

Query: 237 MACATLKRNLDWESKAQLPTKRRRCSPFAAS-------------PSTSPGLKTSES---- 365
           MACATLKR LDWES  Q P KRRRC+PF  +             PSTS GL  + S    
Sbjct: 1   MACATLKRALDWESMNQRPPKRRRCNPFGQAGSNAGPASPSRDGPSTSAGLPHTPSNRFA 60

Query: 366 ----KPSSFGESVSAPVKITPERMAQEIYDEIKRLHRRGQLRLANXXXXXXXXXXXXXXX 533
               +PS F ES  A  K++P++MA+ + +EIKRLH+R QL + +               
Sbjct: 61  KDSTEPSPFSESSLA--KMSPDKMAESLCNEIKRLHKRKQLPITSSALERMQDSESSGSE 118

Query: 534 XXPPH-QSAHGPQ---RARTRALFTFKQVRMICERMLHDQEVALRAEYESVLSTKLAEQY 701
             P   +    PQ   R   +ALFTFKQV++ICE M+ ++E  LR  YESVL+TKLAEQY
Sbjct: 119 MGPESPRRPDSPQNLMRHGEKALFTFKQVQLICESMIKERENQLRERYESVLTTKLAEQY 178

Query: 702 EAFVRFNLXQV 734
           +AFV+F   Q+
Sbjct: 179 DAFVKFTYDQI 189


>AE014296-1248|AAF50569.1|  201|Drosophila melanogaster CG8580-PA,
           isoform A protein.
          Length = 201

 Score =  132 bits (318), Expect = 6e-31
 Identities = 84/191 (43%), Positives = 109/191 (57%), Gaps = 25/191 (13%)
 Frame = +3

Query: 237 MACATLKRNLDWESKAQLPTKRRRCSPFAAS-------------PSTSPGLKTSES---- 365
           MACATLKR LDWES  Q P KRRRC+PF  +             PSTS GL  + S    
Sbjct: 1   MACATLKRALDWESMNQRPPKRRRCNPFGQAGSNAGPASPSRDGPSTSAGLPHTPSNRFA 60

Query: 366 ----KPSSFGESVSAPVKITPERMAQEIYDEIKRLHRRGQLRLANXXXXXXXXXXXXXXX 533
               +PS F ES  A  K++P++MA+ + +EIKRLH+R QL + +               
Sbjct: 61  KDSTEPSPFSESSLA--KMSPDKMAESLCNEIKRLHKRKQLPITSSALERMQDSESSGSE 118

Query: 534 XXPPH-QSAHGPQ---RARTRALFTFKQVRMICERMLHDQEVALRAEYESVLSTKLAEQY 701
             P   +    PQ   R   +ALFTFKQV++ICE M+ ++E  LR  YESVL+TKLAEQY
Sbjct: 119 MGPESPRRPDSPQNLMRHGEKALFTFKQVQLICESMIKERENQLRERYESVLTTKLAEQY 178

Query: 702 EAFVRFNLXQV 734
           +AFV+F   Q+
Sbjct: 179 DAFVKFTYDQI 189


>AE014134-2885|AAF53636.3| 1912|Drosophila melanogaster CG7527-PA,
           isoform A protein.
          Length = 1912

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 22/57 (38%), Positives = 37/57 (64%)
 Frame = +3

Query: 564 PQRARTRALFTFKQVRMICERMLHDQEVALRAEYESVLSTKLAEQYEAFVRFNLXQV 734
           P+    R LFT++Q++++C  M+   E  +  EYE  L+ K+AEQY+ F++FN  Q+
Sbjct: 119 PETEDNRDLFTYQQLKLMCCEMMKQCEDRVVLEYEIALTQKMAEQYDTFIKFNHDQL 175


>AE014296-1208|AAF50601.2| 1770|Drosophila melanogaster CG32387-PA,
            isoform A protein.
          Length = 1770

 Score = 32.3 bits (70), Expect = 0.70
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +1

Query: 484  PTALLHHAHHQVDPKETVHRLINQLMAHNVPAL-VHY 591
            PT   HH HH   P +T+H        HN+  L +H+
Sbjct: 1719 PTTTTHHHHHHQRPLKTIHNYYQTSPFHNIVRLFIHF 1755


>AE013599-3678|AAF47055.3|  181|Drosophila melanogaster CG13560-PA
           protein.
          Length = 181

 Score = 31.9 bits (69), Expect = 0.93
 Identities = 22/56 (39%), Positives = 28/56 (50%)
 Frame = +3

Query: 312 SPFAASPSTSPGLKTSESKPSSFGESVSAPVKITPERMAQEIYDEIKRLHRRGQLR 479
           SP   SPSTSP   TS S  SS G S S+    + +R  +E     +R  RR + R
Sbjct: 115 SPSTTSPSTSPTTSTSPSDSSSSGSSSSSS---SSKRNRKERRRRYRRRQRRQERR 167


>BT006015-1|AAO74698.1|  553|Drosophila melanogaster HL01040p
           protein.
          Length = 553

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 18/61 (29%), Positives = 32/61 (52%)
 Frame = +3

Query: 273 ESKAQLPTKRRRCSPFAASPSTSPGLKTSESKPSSFGESVSAPVKITPERMAQEIYDEIK 452
           ES+A++ TKR      A +PST  G+  +   P ++ E  +   ++   R A+ + DE+ 
Sbjct: 114 ESRAEMDTKRPPL--LAENPSTQYGIANASGAPKTYRELAAGLRELLAVRDAKVLLDELF 171

Query: 453 R 455
           R
Sbjct: 172 R 172


>AE014297-130|AAF52106.1|  553|Drosophila melanogaster CG12001-PA
           protein.
          Length = 553

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 18/61 (29%), Positives = 32/61 (52%)
 Frame = +3

Query: 273 ESKAQLPTKRRRCSPFAASPSTSPGLKTSESKPSSFGESVSAPVKITPERMAQEIYDEIK 452
           ES+A++ TKR      A +PST  G+  +   P ++ E  +   ++   R A+ + DE+ 
Sbjct: 114 ESRAEMDTKRPPL--LAENPSTQYGIANASGAPKTYRELAAGLRELLAVRDAKVLLDELF 171

Query: 453 R 455
           R
Sbjct: 172 R 172


>AY118274-1|AAM48303.1| 1443|Drosophila melanogaster AT03867p protein.
          Length = 1443

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 484  PTALLHHAHHQVDPKETVH 540
            PTA  HH HH   P +T+H
Sbjct: 1410 PTATTHHHHHHQRPLKTIH 1428


>AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1
            protein.
          Length = 5327

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 339  SPGLKTSESKPSSFGESVSAPVKITPERMAQ 431
            SP   T  S+P+S GE+ S+P++  P+  A+
Sbjct: 2505 SPVASTEISRPASAGETASSPIEEAPKDFAE 2535


>AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB
            protein.
          Length = 5412

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 339  SPGLKTSESKPSSFGESVSAPVKITPERMAQ 431
            SP   T  S+P+S GE+ S+P++  P+  A+
Sbjct: 2698 SPVASTEISRPASAGETASSPIEEAPKDFAE 2728


>AE014298-3022|AAF50904.2|  762|Drosophila melanogaster CG1676-PA
           protein.
          Length = 762

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
 Frame = +3

Query: 273 ESKAQLPTKRRRCSPFAASPSTSPGLKTSESKPSS-FGESVSAPVKITPERMAQEIYDEI 449
           + K +  ++RRR S  ++SPS+S    TS S P +     V +P+K+     A+ + ++ 
Sbjct: 108 DKKREHKSRRRRSSSSSSSPSSS----TSSSVPGAPRSPLVKSPMKLLQTLEARRLVEQK 163

Query: 450 KRLHRRGQLR 479
            R  ++ +L+
Sbjct: 164 DRQRKKEELK 173


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,186,013
Number of Sequences: 53049
Number of extensions: 695786
Number of successful extensions: 2305
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2296
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)