Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_P07
         (668 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0162 + 1138420-1138640,1138788-1138830,1139449-1140971,114...    29   2.5  
11_06_0061 - 19702893-19703869,19703960-19704098,19704166-197042...    28   5.9  
06_03_1471 + 30374988-30375959                                         28   5.9  
11_06_0768 + 27129007-27129038,27129140-27129220,27129723-271300...    28   7.7  
08_01_0008 - 65366-65497,65588-65759,65846-65972,66058-66140,662...    28   7.7  
01_06_0751 + 31690411-31690443,31692900-31694240                       28   7.7  

>07_01_0162 +
           1138420-1138640,1138788-1138830,1139449-1140971,
           1141770-1142063,1142145-1142337,1142624-1142694,
           1142781-1144200
          Length = 1254

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 19/71 (26%), Positives = 36/71 (50%)
 Frame = +1

Query: 391 MKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 570
           M+ A  I  +    TD ++  +  K +K   D+  + +D   K + +E DE+++++  C 
Sbjct: 142 MEAALEISSRWPRVTDASL-LRWRKKLKRTSDECSQIMDR-CKRRAMEDDEMEQEVRQCA 199

Query: 571 QPGITSHVTKS 603
            P   +H TKS
Sbjct: 200 FPKRIAHATKS 210


>11_06_0061 - 19702893-19703869,19703960-19704098,19704166-19704287,
            19704362-19704416,19704508-19704624,19704718-19705413,
            19706358-19706393,19707190-19708236
          Length = 1062

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +3

Query: 345  QVRWKSHHALAKRQMDEASQSH*WKENNNNGHGHSLQKTQIGKTR 479
            ++RWK      K++ ++A  S    ENNN    H   K Q    R
Sbjct: 1006 KLRWKGQKMSKKKEDEDAELSRLKAENNNAEEAHGDAKRQFDSIR 1050


>06_03_1471 + 30374988-30375959
          Length = 323

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -3

Query: 642 CVCQSXYGRCG-CR*FCNV*CNSRLAASC 559
           C+C S YG CG    +C   C S+ + SC
Sbjct: 35  CLCCSQYGWCGSTSAYCGSGCQSQCSGSC 63


>11_06_0768 +
           27129007-27129038,27129140-27129220,27129723-27130089,
           27130165-27130255,27130515-27130595,27130764-27131830,
           27132060-27132071,27132465-27133209,27133210-27135244,
           27135712-27135787,27135925-27136029,27137080-27137166
          Length = 1592

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 287 RIAPYLSRKPSRRFPNLEIPSPMEKPSRSRKATNG 391
           R+ P  ++  S R P + IP P++ PS+   AT G
Sbjct: 11  RLGPSAAKSTSARVPGV-IPKPIDLPSQRGTATQG 44


>08_01_0008 -
           65366-65497,65588-65759,65846-65972,66058-66140,
           66232-66329
          Length = 203

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 163 KMSTEAQNTDAAVEQVTQEVKDVKLENGNAPGASNG 270
           ++S EAQ  + AVE    + K  K  N N  GA  G
Sbjct: 57  RISLEAQVVEQAVEVAASKKKSGKNNNNNGEGAKKG 92


>01_06_0751 + 31690411-31690443,31692900-31694240
          Length = 457

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +1

Query: 439 TAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCGQPGITSHVTKSPAA 612
           TAI F  ++  +LG D   K +D L +N K  +DE+  +      P   S  T+ P A
Sbjct: 164 TAIRFYDVQD-RLGYDRPSKAVDWLMRNAKAAIDELPDRAEAPPPPAAAS--TEQPEA 218


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.309    0.123    0.331 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,875,460
Number of Sequences: 37544
Number of extensions: 338204
Number of successful extensions: 780
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)