Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_P07
(668 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34003| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_52992| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_39062| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_51198| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_43457| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_56500| Best HMM Match : Tctex-1 (HMM E-Value=0.0079) 28 6.0
SB_26173| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_49562| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_43065| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_39569| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_31444| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_50496| Best HMM Match : FHA (HMM E-Value=7.8e-07) 28 7.9
>SB_34003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 42.7 bits (96), Expect = 3e-04
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Frame = +1
Query: 385 KWMKQAKVIDGKKITTTDTAIHFKK--LKSV---KLGIDDYQKFLDDLAKNKKVELDEIK 549
K + K+ D KK T D+ I F + +KS K+ ++ L A+ K + +++
Sbjct: 34 KLFRDLKIYD-KKFTQIDSDIIFNRPEVKSKSERKVNFSQFKAALSLCAEKKYGKREDVI 92
Query: 550 KKLTT-CGQPGITSHVTKSPAAAAAVXRLTDTSKYTGSHR 666
K + C G + T A AV RLTDT KYTGSH+
Sbjct: 93 KLVDKICEGKGPVASKTTKVVKAGAVDRLTDTRKYTGSHK 132
>SB_52992| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 516
Score = 37.1 bits (82), Expect = 0.013
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Frame = +1
Query: 418 KKITTTDTAIHFKKLK-----SVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTT-C-GQP 576
+K T+TDT I F + + K+ + ++ L A+ K D++ K C G+
Sbjct: 388 QKFTSTDTDIIFSRTEVKPKTERKINFNQFKVALGLCAEKKFGSKDQVGKLTEKICKGKG 447
Query: 577 GITSHVTKSPAAAAAVXRLTDTSKYTGSHR 666
TS TK+ V RLTDT YTGSH+
Sbjct: 448 PATSGATKA-VKVGGVERLTDTKCYTGSHK 476
>SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 31.5 bits (68), Expect = 0.64
Identities = 29/128 (22%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Frame = +1
Query: 214 QEVKDVKLENGNAPGASNGTSSKSE----DXXXXXXXXXXXXXXXGDPKSDGKAITLSQ- 378
++ K+VK + G ++GTS KSE + P+ K I S+
Sbjct: 483 EKKKEVKKKKGKEKSTTSGTSKKSEAEIQEKKEIKVEEAKPVAKSDKPQESVKDIERSEV 542
Query: 379 -----SD-KWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGID--DYQKFLDDLAKNKKVE 534
+D K ++A +I+ +K++ + + K + VK+ + D +++L +N+++E
Sbjct: 543 YQKLATDYKNTEKALLIEQEKLSEMEKELENSKDEKVKIEQEKADLDIAIENLKRNQEIE 602
Query: 535 LDEIKKKL 558
L+E+K +
Sbjct: 603 LEELKDNI 610
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 6/94 (6%)
Frame = +1
Query: 160 RKMSTEAQNTDAAV----EQVTQEVKDVKLENGNAPGASNGTS--SKSEDXXXXXXXXXX 321
++++ +A + DA+V + +DV + S+GT SK +
Sbjct: 720 QEVTRDAASQDASVTTQGNTSHRNTRDVMSQENTIDMTSHGTIMISKKRELTSQDANKTS 779
Query: 322 XXXXXGDPKSDGKAITLSQSDKWMKQAKVIDGKK 423
G P DGK + S +K + KV GKK
Sbjct: 780 KKTTKGLPSWDGKELVTSHKNKRVTSGKVESGKK 813
>SB_39062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 29.1 bits (62), Expect = 3.4
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 1/89 (1%)
Frame = +1
Query: 271 TSSKSEDXXXXXXXXXXXXXXXGDPKSDGKAITLSQSDKWMKQA-KVIDGKKITTTDTAI 447
T +K+ED PKS KA DK K+ K D K +T + +
Sbjct: 8 TPTKTEDRVPAKKRKLSETKLKSSPKS-AKATPSKTGDKQRKKTPKDQDTNKGSTDNADV 66
Query: 448 HFKKLKSVKLGIDDYQKFLDDLAKNKKVE 534
K+ K KL DY F +L + ++
Sbjct: 67 EIKRDKQGKLVFPDYPDFKPNLTPKEVMQ 95
>SB_51198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1627
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +2
Query: 71 QRKV--RRLNACPLPTRLHI*YHHTNTLNTYK--EKCLLKHRIR 190
QRK+ N CPLP L + Y H T +Y EK +L+ ++
Sbjct: 565 QRKIVLNAFNRCPLPLYLRLAYDHAVTWKSYTPLEKSVLEKNVQ 608
>SB_43457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 464
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = +1
Query: 55 NSISATTKSASLKRLSATDSLAYMISSHKYIKHL*RKMSTEAQNTDAAVEQVTQEVKDVK 234
N + T + + D A S++ RK E Q A +EQV QE + VK
Sbjct: 369 NLLEQTNRQLHQRNQKLLDECASAFQSYQEAFAAQRKQKLEKQEALAELEQVKQEYEAVK 428
Query: 235 LE 240
+E
Sbjct: 429 ME 430
>SB_56500| Best HMM Match : Tctex-1 (HMM E-Value=0.0079)
Length = 502
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 344 PSPMEKPSRSRKATNG*SKPKSLMERK*QQRTRP 445
P P P SRK + G KP SL E K ++ T P
Sbjct: 296 PPPTPPPKPSRKHSLGTRKPISLQESKQRRNTDP 329
>SB_26173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 986
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 62 SVQQRKVRRLNACPLPTRLHI*YHHTNTLNTYKEKCLLKHRIRMP 196
++Q VRR A P P R + YH T T KC ++H + P
Sbjct: 906 TIQSVIVRR--ALPWPPRYKV-YHATRANGTTNTKCTMRHALPWP 947
>SB_49562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 734
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 436 DTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKL 558
D+ F++L LG+DD + ++D N K D KKKL
Sbjct: 400 DSEQMFQQLNHEVLGVDDDEDSVNDEENNSKTGNDLYKKKL 440
>SB_43065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 91 KRLSAT-DSLAYMISSHKYIKHL*RKMSTEAQNTDAAVEQVTQEVKDVK 234
K + AT SLA + +Y+ +++ST + + + QVT+++ DVK
Sbjct: 321 KEMQATKQSLALLKQDKEYLNKQVQELSTRSSLAEEQLGQVTKQLNDVK 369
>SB_39569| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 857
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = +1
Query: 340 DPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAK 519
+PKS T + K + K G+K HFKK V G D ++ + D +
Sbjct: 461 EPKSKSNISTFDKKQK-SRLRKFSKGRKDDILKAKRHFKKGHKVSEGADAHESYEDSRSS 519
Query: 520 NKKV 531
++ V
Sbjct: 520 SENV 523
>SB_31444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +1
Query: 355 GKAITLSQSDKWMKQAKVIDGKKIT--TTDTAIHFKKLKSVKLGID-DYQKFLDDLAKNK 525
GK I + + KW+ I +K T IH K++ VKL ID D +K LD ++K
Sbjct: 68 GKVIQVYRK-KWVIHIDRIQREKANGATVSVGIHPSKVEIVKLKIDKDRKKILDRKNRSK 126
Query: 526 KVE 534
E
Sbjct: 127 LAE 129
>SB_50496| Best HMM Match : FHA (HMM E-Value=7.8e-07)
Length = 766
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 463 KSVKLGIDDYQKFLDDLAKNKKVELDE 543
K V++ D+ + FLD LAK K+E DE
Sbjct: 719 KLVRVSSDENELFLDYLAKRAKLERDE 745
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.309 0.123 0.331
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,256,986
Number of Sequences: 59808
Number of extensions: 392480
Number of successful extensions: 983
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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