Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_P05
(579 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VEN6 Cluster: CG5184-PA, isoform A; n=7; Endopterygot... 192 4e-48
UniRef50_UPI00015B62C0 Cluster: PREDICTED: similar to CG5184-PA;... 170 2e-41
UniRef50_Q8SXD7 Cluster: RH70248p; n=2; Drosophila melanogaster|... 154 2e-36
UniRef50_UPI00003C036B Cluster: PREDICTED: similar to mitochondr... 142 7e-33
UniRef50_UPI0000586F02 Cluster: PREDICTED: hypothetical protein ... 122 5e-27
UniRef50_Q4S8D4 Cluster: Chromosome undetermined SCAF14706, whol... 111 9e-24
UniRef50_P82912 Cluster: 28S ribosomal protein S11, mitochondria... 100 2e-20
UniRef50_Q23155 Cluster: Putative uncharacterized protein; n=2; ... 100 3e-20
UniRef50_Q5DCW6 Cluster: SJCHGC02467 protein; n=1; Schistosoma j... 79 1e-13
UniRef50_A6YE90 Cluster: Ribosomal protein S11; n=5; cellular or... 75 9e-13
UniRef50_P46746 Cluster: Mitochondrial ribosomal protein S11; n=... 74 3e-12
UniRef50_Q9TLV1 Cluster: Chloroplast 30S ribosomal protein S11; ... 68 1e-10
UniRef50_Q98Q07 Cluster: 30S ribosomal protein S11; n=33; Bacter... 64 2e-09
UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellu... 64 2e-09
UniRef50_Q9TCB8 Cluster: Ribosomal protein S11; n=1; Nephroselmi... 64 3e-09
UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellu... 64 3e-09
UniRef50_P04969 Cluster: 30S ribosomal protein S11; n=155; cellu... 62 7e-09
UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48; Bacter... 62 1e-08
UniRef50_P27419 Cluster: Chloroplast 30S ribosomal protein S11; ... 62 1e-08
UniRef50_Q9PQN5 Cluster: 30S ribosomal protein S11; n=1; Ureapla... 60 5e-08
UniRef50_A6PT07 Cluster: Ribosomal protein S11; n=1; Victivallis... 59 6e-08
UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellul... 58 2e-07
UniRef50_Q5LW33 Cluster: 30S ribosomal protein S11; n=15; Bacter... 57 3e-07
UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11; ... 56 8e-07
UniRef50_Q0QIP5 Cluster: Ribosomal protein S11; n=1; Oltmannsiel... 53 4e-06
UniRef50_Q05FK3 Cluster: 30S ribosomal protein S11; n=2; cellula... 51 2e-05
UniRef50_P30059 Cluster: Plastid 30S ribosomal protein S11; n=4;... 49 9e-05
UniRef50_P47422 Cluster: 30S ribosomal protein S11; n=4; Mycopla... 48 1e-04
UniRef50_Q2GEB7 Cluster: 30S ribosomal protein S11; n=1; Neorick... 48 2e-04
UniRef50_Q9G885 Cluster: Ribosomal protein S11; n=1; Malawimonas... 48 2e-04
UniRef50_A6BM57 Cluster: Ribosomal protein S11; n=1; Gnetum parv... 46 5e-04
UniRef50_Q0P3I7 Cluster: Rps11; n=1; Ostreococcus tauri|Rep: Rps... 41 0.018
UniRef50_A2QQ89 Cluster: Contig An08c0050, complete genome; n=6;... 40 0.032
UniRef50_UPI0000DAE6A6 Cluster: hypothetical protein Rgryl_01000... 38 0.23
UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus ... 36 0.91
UniRef50_Q5A3W6 Cluster: Potential spliceosomal U4/U6 snRNP prot... 35 1.6
UniRef50_UPI000023CB06 Cluster: hypothetical protein FG02762.1; ... 34 2.8
UniRef50_Q2TUB4 Cluster: Ribosomal protein S11; n=1; Dictyota di... 34 2.8
UniRef50_Q7R835 Cluster: Putative uncharacterized protein PY0738... 33 3.7
UniRef50_Q7SGU0 Cluster: Putative uncharacterized protein NCU032... 33 3.7
UniRef50_Q1DHD5 Cluster: Putative uncharacterized protein; n=1; ... 33 3.7
UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2; Thermo... 33 3.7
UniRef50_Q49081 Cluster: 30S ribosomal protein; n=1; Mycoplasma ... 33 4.9
>UniRef50_Q9VEN6 Cluster: CG5184-PA, isoform A; n=7;
Endopterygota|Rep: CG5184-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 192 bits (469), Expect = 4e-48
Identities = 86/148 (58%), Positives = 109/148 (73%)
Frame = +1
Query: 52 IPAPDEGVQGEKIIDLDSALKTKQNLFPTLESDYQLYNGIPYKDLPICNIRVSHNNTIFT 231
+PA DEG GEK +D+D+ + K FP + L+NGIP+ +LPICNIRVS NNTI +
Sbjct: 45 LPAKDEGTVGEKTVDIDTLINRKAKFFPDASTANTLFNGIPFNELPICNIRVSPNNTIIS 104
Query: 232 LTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGYNTVRVRVQGLGPGR 411
+T+ G +R+IRSCG+EGFKNT+KG KA+ G+ TVRV+V+GLGPGR
Sbjct: 105 VTDHKGVLRLIRSCGIEGFKNTRKGTNIAAQATAVTISGKAIELGWKTVRVKVRGLGPGR 164
Query: 412 LSAVKGLQMGGLNIVSITDNTHVSWNPP 495
+SA+KGLQMGGLNIVSITDNTHVS+NPP
Sbjct: 165 MSAIKGLQMGGLNIVSITDNTHVSFNPP 192
>UniRef50_UPI00015B62C0 Cluster: PREDICTED: similar to CG5184-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG5184-PA - Nasonia vitripennis
Length = 212
Score = 170 bits (413), Expect = 2e-41
Identities = 79/148 (53%), Positives = 102/148 (68%)
Frame = +1
Query: 52 IPAPDEGVQGEKIIDLDSALKTKQNLFPTLESDYQLYNGIPYKDLPICNIRVSHNNTIFT 231
+P DEG GEK +D+D L +++LFP + +L++GIPYK+LPI NI+V+ NNTI T
Sbjct: 58 MPGKDEGTAGEKSVDIDG-LGVQEDLFPDENTPNRLFDGIPYKELPIFNIKVTPNNTIIT 116
Query: 232 LTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGYNTVRVRVQGLGPGR 411
LT+ G V I++SCG EGF+ +KG KA G T RVR++G+GPGR
Sbjct: 117 LTDFKGGVHILKSCGTEGFRTARKGTNIAAQTTAISISTKAQSIGVRTARVRIRGIGPGR 176
Query: 412 LSAVKGLQMGGLNIVSITDNTHVSWNPP 495
L+A+KGLQMGG NIVSITDNTHVSW PP
Sbjct: 177 LAAIKGLQMGGTNIVSITDNTHVSWCPP 204
>UniRef50_Q8SXD7 Cluster: RH70248p; n=2; Drosophila
melanogaster|Rep: RH70248p - Drosophila melanogaster
(Fruit fly)
Length = 178
Score = 154 bits (373), Expect = 2e-36
Identities = 78/148 (52%), Positives = 98/148 (66%)
Frame = +1
Query: 52 IPAPDEGVQGEKIIDLDSALKTKQNLFPTLESDYQLYNGIPYKDLPICNIRVSHNNTIFT 231
+PA DEG GEK +D+D+ + +LPICNIRVS NNTI +
Sbjct: 45 LPAKDEGTVGEKTVDIDTLIN----------------------ELPICNIRVSPNNTIIS 82
Query: 232 LTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGYNTVRVRVQGLGPGR 411
+T+ G +R+IRSCG+EGFKNT+KG KA+ G+ TVRV+V+GLGPGR
Sbjct: 83 VTDHKGVLRLIRSCGIEGFKNTRKGTNIAAQATAVTISGKAIELGWKTVRVKVRGLGPGR 142
Query: 412 LSAVKGLQMGGLNIVSITDNTHVSWNPP 495
+SA+KGLQMGGLNIVSITDNTHVS+NPP
Sbjct: 143 MSAIKGLQMGGLNIVSITDNTHVSFNPP 170
>UniRef50_UPI00003C036B Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S11 CG5184-PA, isoform A; n=1; Apis
mellifera|Rep: PREDICTED: similar to mitochondrial
ribosomal protein S11 CG5184-PA, isoform A - Apis
mellifera
Length = 196
Score = 142 bits (343), Expect = 7e-33
Identities = 68/141 (48%), Positives = 93/141 (65%)
Frame = +1
Query: 73 VQGEKIIDLDSALKTKQNLFPTLESDYQLYNGIPYKDLPICNIRVSHNNTIFTLTEPDGK 252
++GEK ID +K+K +LFP + YQ ++G+ Y L + NI+ SHNNTI +LT+ G
Sbjct: 50 MEGEKAIDFID-VKSK-SLFPDASTLYQFFDGVQYTQLHVINIKSSHNNTIMSLTDFKGS 107
Query: 253 VRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGYNTVRVRVQGLGPGRLSAVKGL 432
I+ S G+EGFKNTKKG + + G TV++R+QG+GPGR+ A+KGL
Sbjct: 108 GIILHSAGLEGFKNTKKGTNIAAQQAAITFGTRVLNHGIKTVKLRIQGIGPGRMGAIKGL 167
Query: 433 QMGGLNIVSITDNTHVSWNPP 495
Q+ LNIVSITD+T VSWNPP
Sbjct: 168 QLTELNIVSITDDTRVSWNPP 188
>UniRef50_UPI0000586F02 Cluster: PREDICTED: hypothetical protein
isoform 1; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein isoform 1 -
Strongylocentrotus purpuratus
Length = 261
Score = 122 bits (295), Expect = 5e-27
Identities = 57/111 (51%), Positives = 73/111 (65%)
Frame = +1
Query: 157 LYNGIPYKDLPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXX 336
++NGIPY LPI NI+ ++NNT ++ E G+ SCG EGFKN KKG
Sbjct: 141 IFNGIPYDQLPIVNIKATYNNTHVSVAEHTGRTVARTSCGTEGFKNAKKGTAIAAQTAAI 200
Query: 337 XXXXKAVVQGYNTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
KAV +G N VRV ++G+GPGR +++KGLQMGGL+IVSITDNT V N
Sbjct: 201 AAATKAVDKGMNAVRVVIKGIGPGRQTSIKGLQMGGLDIVSITDNTPVPHN 251
>UniRef50_Q4S8D4 Cluster: Chromosome undetermined SCAF14706, whole
genome shotgun sequence; n=3; cellular organisms|Rep:
Chromosome undetermined SCAF14706, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 111 bits (268), Expect = 9e-24
Identities = 53/108 (49%), Positives = 67/108 (62%)
Frame = +1
Query: 166 GIPYKDLPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXX 345
G P++ LPI +++ ++NNT +T+ GK + SCG EGFKN KK
Sbjct: 98 GTPFEQLPIAHVKATYNNTHIQVTDSAGKSMVRTSCGTEGFKNIKKSTPIAAQTAGISAA 157
Query: 346 XKAVVQGYNTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
KA +G VRV V+GLGPGRLSA+KGL MGGL +VSITDNT V N
Sbjct: 158 AKATAKGVTFVRVVVKGLGPGRLSAIKGLTMGGLEVVSITDNTPVPHN 205
>UniRef50_P82912 Cluster: 28S ribosomal protein S11, mitochondrial
precursor; n=31; cellular organisms|Rep: 28S ribosomal
protein S11, mitochondrial precursor - Homo sapiens
(Human)
Length = 194
Score = 100 bits (240), Expect = 2e-20
Identities = 50/127 (39%), Positives = 72/127 (56%), Gaps = 2/127 (1%)
Frame = +1
Query: 115 TKQNLFPTL--ESDYQLYNGIPYKDLPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGF 288
TK +++P + E + G ++++PI +I+ SHNNT + + SCG EGF
Sbjct: 58 TKFSIYPPIPGEESSLRWAGKKFEEIPIAHIKASHNNTQIQVVSASNEPLAFASCGTEGF 117
Query: 289 KNTKKGXXXXXXXXXXXXXXKAVVQGYNTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITD 468
+N KKG +A +G +RV V+GLGPGRLSA+ GL MGGL ++SITD
Sbjct: 118 RNAKKGTGIAAQTAGIAAAARAKQKGVIHIRVVVKGLGPGRLSAMHGLIMGGLEVISITD 177
Query: 469 NTHVSWN 489
NT + N
Sbjct: 178 NTPIPHN 184
>UniRef50_Q23155 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 208
Score = 100 bits (239), Expect = 3e-20
Identities = 47/114 (41%), Positives = 71/114 (62%)
Frame = +1
Query: 133 PTLESDYQLYNGIPYKDLPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXX 312
PT E+ Q ++G+ Y +LP+ IR S NNT+ T+ + +V SC +EGFKN +K
Sbjct: 80 PTAETLKQQFDGVAYHELPLVYIRASKNNTLVTVMDNKNEVITSTSCRLEGFKNARKKTT 139
Query: 313 XXXXXXXXXXXXKAVVQGYNTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNT 474
+ V +G TVRV+V+GLGPGR++ VKGL + G+++VSI+D+T
Sbjct: 140 IAGQTTGVAAGQRLVRRGIRTVRVQVKGLGPGRMTCVKGLTVAGVHVVSISDHT 193
>UniRef50_Q5DCW6 Cluster: SJCHGC02467 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02467 protein - Schistosoma
japonicum (Blood fluke)
Length = 185
Score = 78.6 bits (185), Expect = 1e-13
Identities = 41/104 (39%), Positives = 59/104 (56%)
Frame = +1
Query: 175 YKDLPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKA 354
Y ++PI ++ NN I TLT+ +G+V SCG EGF+N +K KA
Sbjct: 70 YYEIPILHLISRKNNLIATLTDCNGRVLNGTSCGAEGFRNARKKSTVAAQTVGISVGLKA 129
Query: 355 VVQGYNTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSW 486
G VRV ++G G +LSA+ GL + GL IVS+TD+T+V +
Sbjct: 130 KKLGIGAVRVILRGKGSDKLSALSGLNISGLKIVSLTDDTNVHY 173
>UniRef50_A6YE90 Cluster: Ribosomal protein S11; n=5; cellular
organisms|Rep: Ribosomal protein S11 - Chlorokybus
atmophyticus (Soil alga)
Length = 262
Score = 75.4 bits (177), Expect = 9e-13
Identities = 36/102 (35%), Positives = 56/102 (54%)
Frame = +1
Query: 184 LPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQ 363
L + +I+ + NNTI T+T+ DG + S G GFK +++ K++
Sbjct: 151 LGVAHIQTTLNNTIITITDLDGNTKSWSSSGSIGFKGSRRKTSYAAQAAAETAAKKSIQL 210
Query: 364 GYNTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
G V V+++G GPGR S+++GLQ+GGL I I D T + N
Sbjct: 211 GIKDVTVKIRGFGPGRDSSLRGLQIGGLKIYKIQDTTPLPHN 252
>UniRef50_P46746 Cluster: Mitochondrial ribosomal protein S11; n=1;
Prototheca wickerhamii|Rep: Mitochondrial ribosomal
protein S11 - Prototheca wickerhamii
Length = 128
Score = 73.7 bits (173), Expect = 3e-12
Identities = 36/100 (36%), Positives = 56/100 (56%)
Frame = +1
Query: 190 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGY 369
I +I+ + NNT+ TLT+ +G + S G GFKN++K KA +GY
Sbjct: 19 IVHIQSTTNNTLITLTDLEGNTQFFVSAGTLGFKNSRKSTVYASGAAAEALASKAFNEGY 78
Query: 370 NTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
T+ V+++GLG G+ SA++GLQ L I I + T ++ N
Sbjct: 79 RTIIVKIKGLGYGKKSAIRGLQKSNLVIKQIQEVTPIAHN 118
>UniRef50_Q9TLV1 Cluster: Chloroplast 30S ribosomal protein S11;
n=10; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S11 - Cyanidium caldarium
Length = 129
Score = 68.1 bits (159), Expect = 1e-10
Identities = 37/97 (38%), Positives = 48/97 (49%)
Frame = +1
Query: 199 IRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGYNTV 378
I + NNTI T T+ GKV S G EGFK KKG + QG +
Sbjct: 23 INSTFNNTIVTATDCYGKVIAWASGGTEGFKGAKKGTPFAAQSATEKLIKALLEQGTQRI 82
Query: 379 RVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
+ V G GPGR ++++ Q GL I+SI D T V +N
Sbjct: 83 HISVSGPGPGRETSIRSFQTSGLQIISIKDITSVPFN 119
>UniRef50_Q98Q07 Cluster: 30S ribosomal protein S11; n=33;
Bacteria|Rep: 30S ribosomal protein S11 - Mycoplasma
pulmonis
Length = 136
Score = 64.5 bits (150), Expect = 2e-09
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Frame = +1
Query: 190 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGY 369
+ +I +HNNTI T ++ G V S G G+K TKK KA G
Sbjct: 22 VAHIHSTHNNTIVTFSDEKGNVISWASSGTIGYKGTKKKTAYAAGLAAQNASEKAKEHGI 81
Query: 370 NTVRVRVQGLGPGRLSAVKGLQMGGLN---IVSITDNTHVSWNPP 495
V VRV+G+G GR +A K +++ G++ IV +T H PP
Sbjct: 82 REVSVRVKGIGQGRDAARKQIEVSGISVSQIVDVTPQAHNGTRPP 126
>UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellular
organisms|Rep: 30S ribosomal protein S11 - Polaromonas
sp. (strain JS666 / ATCC BAA-500)
Length = 134
Score = 64.1 bits (149), Expect = 2e-09
Identities = 35/100 (35%), Positives = 49/100 (49%)
Frame = +1
Query: 190 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGY 369
I ++ S NNTI T+T+ G S G +GFK ++K A+ QG
Sbjct: 25 IAHVHASFNNTIITITDRQGNALSWASSGGQGFKGSRKSTPFAAQVASEVAGRAAIEQGI 84
Query: 370 NTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
+ V ++G GPGR S+V+ L G+ I SI D T V N
Sbjct: 85 KNLDVEIKGPGPGRESSVRALGALGIRINSIADVTPVPHN 124
>UniRef50_Q9TCB8 Cluster: Ribosomal protein S11; n=1; Nephroselmis
olivacea|Rep: Ribosomal protein S11 - Nephroselmis
olivacea
Length = 128
Score = 63.7 bits (148), Expect = 3e-09
Identities = 34/102 (33%), Positives = 53/102 (51%)
Frame = +1
Query: 184 LPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQ 363
L I ++ + NNTI TLT+ G + S G GFK ++ K+
Sbjct: 17 LGIIYVQSTKNNTILTLTDSVGAAKAWSSAGSVGFKGARRATGFAAQTAAETLAKKSSRL 76
Query: 364 GYNTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
G+ + V+++GLG GR S+++GL++GGL I I D T + N
Sbjct: 77 GFFHIDVKLKGLGNGRRSSLRGLKLGGLKIRKIQDITPLPHN 118
>UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellular
organisms|Rep: 30S ribosomal protein S11 - Acidobacteria
bacterium (strain Ellin345)
Length = 142
Score = 63.7 bits (148), Expect = 3e-09
Identities = 35/100 (35%), Positives = 51/100 (51%)
Frame = +1
Query: 190 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGY 369
+ +I+ S NNTI T+++P G V +S G GF+ ++KG A G
Sbjct: 33 LAHIQASFNNTIVTISDPSGNVVSWKSSGSLGFRGSRKGTPFAAQQAAMTAANMARDHGM 92
Query: 370 NTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
++ VRV G G GR SAV+ L GL++ I D T + N
Sbjct: 93 RSLDVRVAGPGSGRESAVRALAAAGLDVRVIRDVTPIPHN 132
>UniRef50_P04969 Cluster: 30S ribosomal protein S11; n=155; cellular
organisms|Rep: 30S ribosomal protein S11 - Bacillus
subtilis
Length = 131
Score = 62.5 bits (145), Expect = 7e-09
Identities = 33/100 (33%), Positives = 49/100 (49%)
Frame = +1
Query: 190 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGY 369
I +IR + NNTI T+T+ G S G GF+ ++K ++ G
Sbjct: 22 IAHIRSTFNNTIVTITDTHGNAISWSSAGALGFRGSRKSTPFAAQMAAETAAKGSIEHGL 81
Query: 370 NTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
T+ V V+G G GR +A++ LQ GL + +I D T V N
Sbjct: 82 KTLEVTVKGPGSGREAAIRALQAAGLEVTAIRDVTPVPHN 121
>UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48;
Bacteria|Rep: 30S ribosomal protein S11 - Streptococcus
mutans
Length = 127
Score = 61.7 bits (143), Expect = 1e-08
Identities = 35/100 (35%), Positives = 45/100 (45%)
Frame = +1
Query: 190 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGY 369
I +I + NNTI +T+ G S G GFK ++K A G
Sbjct: 18 IAHIHATFNNTIVMITDVHGNALAWSSAGALGFKGSRKSTPFAAQMAAEAAAKSAQEHGL 77
Query: 370 NTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
TV V V+G G GR SA++ L GL + SI D T V N
Sbjct: 78 KTVEVTVKGPGSGRESAIRALAAAGLEVTSIRDVTPVPHN 117
>UniRef50_P27419 Cluster: Chloroplast 30S ribosomal protein S11;
n=1; Euglena gracilis|Rep: Chloroplast 30S ribosomal
protein S11 - Euglena gracilis
Length = 129
Score = 61.7 bits (143), Expect = 1e-08
Identities = 33/100 (33%), Positives = 51/100 (51%)
Frame = +1
Query: 190 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGY 369
I +I+ ++NN + ++++P G V S G GFK++KK KA+ QG
Sbjct: 20 IVHIKTTYNNVLVSVSDPKGNVIAWSSSGACGFKSSKKATPLATKTTTAIAVKKAIEQGL 79
Query: 370 NTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
V + + G G GR +A+K +Q GL I I D T + N
Sbjct: 80 QKVEINISGPGTGRETALKCVQSLGLRISCIRDVTPLPHN 119
>UniRef50_Q9PQN5 Cluster: 30S ribosomal protein S11; n=1; Ureaplasma
parvum|Rep: 30S ribosomal protein S11 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 121
Score = 59.7 bits (138), Expect = 5e-08
Identities = 33/100 (33%), Positives = 43/100 (43%)
Frame = +1
Query: 190 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGY 369
I I + NNTI TL + G V S G G+K TKK + G
Sbjct: 13 IAYIHATKNNTIITLADEQGSVLSWASSGSIGYKGTKKKTPYSAGIAAEAAAKAVIDMGL 72
Query: 370 NTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
+V V V G G R +A++ LQ GL + I D T + N
Sbjct: 73 KSVEVHVNGTGASRDTAIRSLQAAGLEVTKIKDVTPIPHN 112
>UniRef50_A6PT07 Cluster: Ribosomal protein S11; n=1; Victivallis
vadensis ATCC BAA-548|Rep: Ribosomal protein S11 -
Victivallis vadensis ATCC BAA-548
Length = 148
Score = 59.3 bits (137), Expect = 6e-08
Identities = 34/100 (34%), Positives = 47/100 (47%)
Frame = +1
Query: 190 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGY 369
I + + NNT T T+ G V + G GFK ++K KA + G
Sbjct: 39 IAYVLATFNNTKVTFTDLHGNVICWSTGGKNGFKGSRKSTAYAAQVIAGDAAKKAQLVGM 98
Query: 370 NTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
V VR++G G GR SAV+G+ G+ I +I D T V N
Sbjct: 99 KEVEVRIKGPGAGRESAVRGIAAAGMEISTIKDITPVPHN 138
>UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellular
organisms|Rep: 30S ribosomal protein S11 - Shewanella
oneidensis
Length = 130
Score = 57.6 bits (133), Expect = 2e-07
Identities = 32/100 (32%), Positives = 46/100 (46%)
Frame = +1
Query: 190 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGY 369
+ +I S NNTI T+T+ G + G GF+ ++K A G
Sbjct: 21 MAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTPFAAQVAAERAGAAAQDYGL 80
Query: 370 NTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
+ V V+G GPGR SA++ L G I +ITD T + N
Sbjct: 81 KNLEVFVKGPGPGRESAIRALNAVGYKITNITDVTPIPHN 120
>UniRef50_Q5LW33 Cluster: 30S ribosomal protein S11; n=15;
Bacteria|Rep: 30S ribosomal protein S11 - Silicibacter
pomeroyi
Length = 130
Score = 57.2 bits (132), Expect = 3e-07
Identities = 32/100 (32%), Positives = 46/100 (46%)
Frame = +1
Query: 190 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGY 369
+ ++ + NNT +++ G S G GFK ++K KA G
Sbjct: 21 VAHVNSTFNNTKILISDVQGNAISWSSAGTMGFKGSRKSTPYAAQLAAEDAGRKAQDHGV 80
Query: 370 NTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
T+ V VQG G GR SA++ L G NI SI D T ++ N
Sbjct: 81 KTLEVEVQGPGSGRESALRALAAVGFNITSIRDVTPIAHN 120
>UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11;
n=85; Tracheophyta|Rep: Chloroplast 30S ribosomal
protein S11 - Arabidopsis thaliana (Mouse-ear cress)
Length = 138
Score = 55.6 bits (128), Expect = 8e-07
Identities = 29/100 (29%), Positives = 50/100 (50%)
Frame = +1
Query: 190 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGY 369
+ +++ S NNTI T+T+ G+V S G GF+ T++G V QG
Sbjct: 29 VIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFRGTRRGTPFAAQTAAGNAIRAVVDQGM 88
Query: 370 NTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
VR++G G GR +A++ ++ G+ + + D T + N
Sbjct: 89 QRAEVRIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHN 128
>UniRef50_Q0QIP5 Cluster: Ribosomal protein S11; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S11 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 194
Score = 53.2 bits (122), Expect = 4e-06
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +1
Query: 157 LYNGIPYKDLP-ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXX 333
++N + YK + +++ + NNTI LT GKV+ + S G G ++
Sbjct: 73 IWNLVSYKKADAVLHLKKTRNNTIIALTNKIGKVKSVLSAGCLGLTGPRRATVYAGERVC 132
Query: 334 XXXXXKAVVQGYNTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
A+ GY V V+ +G G GR VK + GL I+ I + + + N
Sbjct: 133 EQMAKLALKMGYKRVIVKTRGTGYGRSQCVKAIAKTGLKILLIEEVSSIPHN 184
>UniRef50_Q05FK3 Cluster: 30S ribosomal protein S11; n=2; cellular
organisms|Rep: 30S ribosomal protein S11 - Carsonella
ruddii (strain PV)
Length = 118
Score = 51.2 bits (117), Expect = 2e-05
Identities = 31/105 (29%), Positives = 47/105 (44%)
Frame = +1
Query: 175 YKDLPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKA 354
YK I I + NNTI TLT+ G + S G+ G+K KK
Sbjct: 4 YKKRGIIYIHSTFNNTISTLTDVFGNTIVWYSAGILGYKGPKKSTSLASQLISEKITISI 63
Query: 355 VVQGYNTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
+ V + ++GLG G+ + ++ + G+ I SITD T + N
Sbjct: 64 LKNNIKVVDIYIKGLGLGKETTLRIINNSGIFIRSITDITPIPHN 108
>UniRef50_P30059 Cluster: Plastid 30S ribosomal protein S11; n=4;
Streptophyta|Rep: Plastid 30S ribosomal protein S11 -
Epifagus virginiana (Beechdrops)
Length = 136
Score = 48.8 bits (111), Expect = 9e-05
Identities = 27/100 (27%), Positives = 48/100 (48%)
Frame = +1
Query: 190 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGY 369
+ +++ S NNTI +T+ G+V S G GFK T++G +VQG
Sbjct: 29 VIHVQTSFNNTIVAVTDIKGRVVSWSSAGTCGFKGTRRGTSFAAQIAATNAI--RIVQGM 86
Query: 370 NTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
V ++G G GR + ++ ++ G+ + + D T + N
Sbjct: 87 QRAEVMIKGPGIGRDAVLRAIRGSGVLLTFVRDVTPMPHN 126
>UniRef50_P47422 Cluster: 30S ribosomal protein S11; n=4;
Mycoplasma|Rep: 30S ribosomal protein S11 - Mycoplasma
genitalium
Length = 131
Score = 48.4 bits (110), Expect = 1e-04
Identities = 25/100 (25%), Positives = 43/100 (43%)
Frame = +1
Query: 190 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGY 369
+ ++ S NNTI + T+P G V S G GFK +K G
Sbjct: 13 LIHVSCSPNNTIVSATDPSGNVLCWASSGTVGFKGFRKKTPYSAGVAADKVAKTVKEMGM 72
Query: 370 NTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
+V++ ++G G G+ + ++ G+ I I + T + N
Sbjct: 73 GSVKMYLKGTGRGKDTTIRSFANAGITITEINEKTPIPHN 112
>UniRef50_Q2GEB7 Cluster: 30S ribosomal protein S11; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S11 - Neorickettsia sennetsu (strain Miyayama)
Length = 120
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/98 (27%), Positives = 44/98 (44%)
Frame = +1
Query: 196 NIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGYNT 375
++ V+ NN ++T+ G V+ S G GFK KK K G
Sbjct: 13 HVIVTFNNVYISVTDHQGNVQGWASSGSVGFKGNKKSTAYAAQSVATTLMTKLKRIGLKI 72
Query: 376 VRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
+ V + G P R +A++ ++ G+ I+S+ D T V N
Sbjct: 73 LNVHLSGSNPIREAALRAIRNSGIVIISLQDMTPVPHN 110
>UniRef50_Q9G885 Cluster: Ribosomal protein S11; n=1; Malawimonas
jakobiformis|Rep: Ribosomal protein S11 - Malawimonas
jakobiformis
Length = 134
Score = 47.6 bits (108), Expect = 2e-04
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 2/107 (1%)
Frame = +1
Query: 175 YKDLPICNIRV--SHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXX 348
YK IC + V + NNT TLT G + S G GFK K+
Sbjct: 18 YKKYKICKLFVKKTQNNTFVTLTNIKGNTLVYYSTGKLGFKGAKRSTAHASEIIFQQIVK 77
Query: 349 KAVVQGYNTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
V G + + G+G + +K L + + I SI +N +++N
Sbjct: 78 YCVSLGIKKIMLSFNGIGYNFKTYIKQLSLNKIRISSIRNNNPITYN 124
>UniRef50_A6BM57 Cluster: Ribosomal protein S11; n=1; Gnetum
parvifolium|Rep: Ribosomal protein S11 - Gnetum
parvifolium
Length = 132
Score = 46.4 bits (105), Expect = 5e-04
Identities = 35/108 (32%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
Frame = +1
Query: 181 DLPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVV 360
D I +IR S NNTI T+T G V S G GFK KKG V+
Sbjct: 23 DKGIIHIRASFNNTIITVTNVLGCVISWSSAGACGFKGPKKGSAFAAQKATENVIRMVVI 82
Query: 361 QGYNTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNT---HVSWNPP 495
N V + G G GR +A++ + + I ++ D T H PP
Sbjct: 83 ---NRATVLITGCGKGRDAALRVIHQNYIPIHAVLDVTPTPHNGCRPP 127
>UniRef50_Q0P3I7 Cluster: Rps11; n=1; Ostreococcus tauri|Rep: Rps11
- Ostreococcus tauri
Length = 121
Score = 41.1 bits (92), Expect = 0.018
Identities = 25/106 (23%), Positives = 43/106 (40%)
Frame = +1
Query: 172 PYKDLPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXK 351
P I I + NNT LT+ +G S G GFK +KK
Sbjct: 6 PMNQTAILCISTTLNNTFVNLTDLEGNTLCCVSSGSLGFKGSKKSSSYAAQSTTEKVLQF 65
Query: 352 AVVQGYNTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
Q + ++++G+G + +++K + IV I + T ++N
Sbjct: 66 CAQQSIEKLMIKLRGVGYAKDASLKTVLNQNFKIVHIQETTQRAFN 111
>UniRef50_A2QQ89 Cluster: Contig An08c0050, complete genome; n=6;
Eurotiomycetidae|Rep: Contig An08c0050, complete genome
- Aspergillus niger
Length = 235
Score = 40.3 bits (90), Expect = 0.032
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +1
Query: 73 VQGEKIIDLDSALKTKQNLFPTLESDYQLYNGIPYKDL-PICNIRV--SHNNTIFTLTEP 243
+QGEK+ + + +LE++ L N PY D P ++ V +NTI TLT P
Sbjct: 77 MQGEKVRSNQGVSRDYSRMAESLEAE--LINQ-PYADRSPPYHLHVYCHKHNTILTLTRP 133
Query: 244 DGKVRIIRSCGMEGFKNTKK 303
+G + +SCG GF+ +K+
Sbjct: 134 NGDPMLAKSCGHLGFRKSKR 153
>UniRef50_UPI0000DAE6A6 Cluster: hypothetical protein
Rgryl_01000965; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000965 - Rickettsiella
grylli
Length = 147
Score = 37.5 bits (83), Expect = 0.23
Identities = 31/107 (28%), Positives = 42/107 (39%), Gaps = 7/107 (6%)
Frame = +1
Query: 190 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAV---- 357
I ++ S NNTI + + G I S G FK TKKG KAV
Sbjct: 32 IVHLSTSFNNTIICIRK-GGDTLGISSAGACDFKGTKKGTAFAARVAFEKAIEKAVDKYK 90
Query: 358 ---VQGYNTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
V VR++G G G A+ L+ + + I + T V N
Sbjct: 91 SKYKHNLGRVEVRIKGPGQGSEQAIMALKNKDIEVTQILNITGVPHN 137
>UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus
oeni ATCC BAA-1163|Rep: Ribosomal protein S11 -
Oenococcus oeni ATCC BAA-1163
Length = 113
Score = 35.5 bits (78), Expect = 0.91
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = +1
Query: 190 ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGY 369
+ +I + NNTI +T+ G S G GFK ++K A+ Q
Sbjct: 23 VAHIHSTFNNTIVLITDEAGNAVSWSSAGSLGFKGSRKSTPFAAQLAGEAAAKAAMEQNM 82
Query: 370 NTVRVRVQGLG 402
++V + V+G G
Sbjct: 83 HSVAISVKGPG 93
>UniRef50_Q5A3W6 Cluster: Potential spliceosomal U4/U6 snRNP protein
Prp4p; n=1; Candida albicans|Rep: Potential spliceosomal
U4/U6 snRNP protein Prp4p - Candida albicans (Yeast)
Length = 458
Score = 34.7 bits (76), Expect = 1.6
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 109 LKTKQNLFPTLESDYQLYNG--IPYKDLPICNIRVSHNNTIFTLTEPDGKVRIIRSCGME 282
LK+++ L L S Y++Y IP I NI++S+N+ DG + ++ S +
Sbjct: 86 LKSRRQLNSNL-SKYEIYGSQFIPGTTRTISNIKISNNDKYIACGSWDGSINLLNSQDLS 144
Query: 283 GFKNTKKG 306
FK T G
Sbjct: 145 IFKKTPSG 152
>UniRef50_UPI000023CB06 Cluster: hypothetical protein FG02762.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG02762.1 - Gibberella zeae PH-1
Length = 230
Score = 33.9 bits (74), Expect = 2.8
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Frame = +1
Query: 208 SH-NNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGY----N 372
SH +NT T T+P+ I S G GF+ +++G + + G+ N
Sbjct: 116 SHKHNTHITCTKPNRDPIISLSAGNIGFRKSRRGTFDSAYSLTKYVLERLIHTGWPVKMN 175
Query: 373 TVRVRVQGLGPGRLSAVKGLQM--GGL---NIVSITDNTHVSW 486
+ V ++G G GR +A+K L G + IV + D+T + +
Sbjct: 176 RLEVVMRGFGQGREAALKVLMSPEGKVLRDKIVRVADSTRIKF 218
>UniRef50_Q2TUB4 Cluster: Ribosomal protein S11; n=1; Dictyota
dichotoma|Rep: Ribosomal protein S11 - Dictyota
dichotoma
Length = 138
Score = 33.9 bits (74), Expect = 2.8
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +1
Query: 190 ICNIRVSHNNTIFTLTE-PDGKVRIIRSCG-MEGFKNTKKGXXXXXXXXXXXXXXKAVVQ 363
IC +R + N + +L + + KV++ S G ++G K+ K
Sbjct: 10 IC-VRTTKRNVLISLIDINEKKVKLSSSLGCLKGTGFDKRANYASVRAFSEIFTRKIQEL 68
Query: 364 GYNTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
GY V + ++GLG R++ + ++ L + ITD T S N
Sbjct: 69 GYTDVSLMLRGLGVSRVALIHVIRDYNLKLNRITDETLSSHN 110
>UniRef50_Q7R835 Cluster: Putative uncharacterized protein PY07388;
n=1; Plasmodium yoelii yoelii|Rep: Putative
uncharacterized protein PY07388 - Plasmodium yoelii
yoelii
Length = 197
Score = 33.5 bits (73), Expect = 3.7
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +1
Query: 73 VQGEKIIDLDSALKTKQNLFPTLESDYQLYNGIPYKDLPICNIRVSHNNTIFTL 234
V E IID+D + +NLF TL D ++YN I D + N+ ++++IF L
Sbjct: 39 VLNEPIIDIDFS----ENLFHTLLFDLEIYNNIYTLDETLLNLEKLNHSSIFKL 88
>UniRef50_Q7SGU0 Cluster: Putative uncharacterized protein
NCU03230.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU03230.1 - Neurospora crassa
Length = 376
Score = 33.5 bits (73), Expect = 3.7
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Frame = +1
Query: 208 SH-NNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKA-VVQGYNTVR 381
SH +NT T+T+P+ I SCG GFK + + K + +N ++
Sbjct: 262 SHKHNTHITVTKPNRDALISLSCGNLGFKKSNRKHYDSAYQLGAYVVDKMHQMNLHNKIK 321
Query: 382 ---VRVQGLGPGRLSAVKGL-----QMGGLNIVSITDNTHVSW 486
V ++G GPGR + +K L +M +IV ++D T + +
Sbjct: 322 KMEVVLRGFGPGREAVIKVLLGNEGRMLRSSIVRVSDATRLKF 364
>UniRef50_Q1DHD5 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 213
Score = 33.5 bits (73), Expect = 3.7
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +1
Query: 214 NNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGY----NTVR 381
+NT TLT P+ + SCG GF+ + +G K +G+ +
Sbjct: 102 HNTHLTLTRPNRDPMMSISCGTIGFRKSHRGGYDPAHQLCSYMMAKIQERGFLMDIRQLE 161
Query: 382 VRVQGLGPGRLSAVKGL 432
V ++G GPGR + K L
Sbjct: 162 VVLRGFGPGREAFTKVL 178
>UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S11P -
Cenarchaeum symbiosum
Length = 198
Score = 33.5 bits (73), Expect = 3.7
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 9/108 (8%)
Frame = +1
Query: 184 LPICNIRVSHNNTIFTLTEPDGKVRI-IRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVV 360
L I +I S+NNTI +T+ G + I S G+ + + A
Sbjct: 75 LGIAHIYSSYNNTIIHMTDLTGAETVSISSGGVHVNADRYESSPFAAMKAANKVIESARA 134
Query: 361 QGYNTVRVRVQGLG--------PGRLSAVKGLQMGGLNIVSITDNTHV 480
+G+ +RV+ +G PG +A++ L GG I I D T +
Sbjct: 135 KGFTGFHIRVRAVGGVGSRVPGPGAQAAIRALARGGFRIGRIDDVTPI 182
>UniRef50_Q49081 Cluster: 30S ribosomal protein; n=1; Mycoplasma
capricolum|Rep: 30S ribosomal protein - Mycoplasma
capricolum
Length = 80
Score = 33.1 bits (72), Expect = 4.9
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1
Query: 178 KDLP--ICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKK 303
K++P I +I + NNTI T+++ G V S G GFK +KK
Sbjct: 6 KNIPKGIAHIHSTFNNTIVTVSDEKGNVLSWSSAGAIGFKGSKK 49
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.317 0.137 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 485,179,969
Number of Sequences: 1657284
Number of extensions: 8516103
Number of successful extensions: 21136
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 20460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21121
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -