Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_P05
         (579 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0022 - 5054548-5054663,5054899-5055103,5055194-5055261,505...    31   0.88 
04_01_0110 + 1123238-1123450,1124211-1124997,1126126-1126403           29   2.7  

>03_02_0022 -
           5054548-5054663,5054899-5055103,5055194-5055261,
           5055573-5055861,5056687-5056753,5057928-5057974
          Length = 263

 Score = 30.7 bits (66), Expect = 0.88
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = -2

Query: 296 VFLNPSMPHDLMILTLPSGSVNVNIVLLWLTRILHIGRSL 177
           +F+N S PH  M+++ PS  + + + LLW   I+H+  SL
Sbjct: 26  LFMNQSPPHVWMLMSRPSVIIKLILGLLWF--IVHLAISL 63


>04_01_0110 + 1123238-1123450,1124211-1124997,1126126-1126403
          Length = 425

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -2

Query: 449 FKPPICKPLTADNRPGPKPWTLTRTVL 369
           +KPP+  P +A  RPG KP    RT L
Sbjct: 25  YKPPLPLPASASLRPGRKPAPRLRTAL 51


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.317    0.137    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,001,072
Number of Sequences: 37544
Number of extensions: 232832
Number of successful extensions: 503
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1352600424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)