Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_P05
(579 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK222933-1|BAD96653.1| 194|Homo sapiens mitochondrial ribosomal... 101 2e-21
AK026165-1|BAB15381.1| 194|Homo sapiens protein ( Homo sapiens ... 101 2e-21
BC032378-1|AAH32378.1| 194|Homo sapiens mitochondrial ribosomal... 100 3e-21
BC012489-1|AAH12489.1| 193|Homo sapiens mitochondrial ribosomal... 100 3e-21
AK223152-1|BAD96872.1| 194|Homo sapiens mitochondrial ribosomal... 100 3e-21
AF320777-1|AAK97314.1| 193|Homo sapiens cervical cancer proto-o... 100 3e-21
AB049944-1|BAB40997.1| 194|Homo sapiens mitochondrial ribosomal... 100 3e-21
BC009451-1|AAH09451.1| 160|Homo sapiens Unknown (protein for IM... 79 1e-14
>AK222933-1|BAD96653.1| 194|Homo sapiens mitochondrial ribosomal
protein S11 isoform a variant protein.
Length = 194
Score = 101 bits (241), Expect = 2e-21
Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
Frame = +1
Query: 82 EKIIDLDSALKTKQNLFPTL--ESDYQLYNGIPYKDLPICNIRVSHNNTIFTLTEPDGKV 255
+K+ + TK +++P + E + G ++++PI +I+ SHNNT + +
Sbjct: 47 QKVEQYAAPSHTKFSIYPPIPGEESSLRWAGKKFEEIPIAHIKASHNNTQIQVVSASNEP 106
Query: 256 RIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGYNTVRVRVQGLGPGRLSAVKGLQ 435
SCG EGF+N KKG +A +G +RV V+GLGPGRLSA+ GL
Sbjct: 107 LAFASCGTEGFRNAKKGTGIAAQTAGIAAAARAKQKGVIHIRVVVKGLGPGRLSAMHGLI 166
Query: 436 MGGLNIVSITDNTHVSWN 489
MGGL ++SITDNT + N
Sbjct: 167 MGGLEVISITDNTPIPHN 184
>AK026165-1|BAB15381.1| 194|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22512 fis, clone HRC11839. ).
Length = 194
Score = 101 bits (241), Expect = 2e-21
Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
Frame = +1
Query: 82 EKIIDLDSALKTKQNLFPTL--ESDYQLYNGIPYKDLPICNIRVSHNNTIFTLTEPDGKV 255
+K+ + TK +++P + E + G ++++PI +I+ SHNNT + +
Sbjct: 47 QKVEQYAAPSHTKFSIYPPIPGEESSLRWAGKKFEEIPIAHIKASHNNTQIQVVSASNEP 106
Query: 256 RIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGYNTVRVRVQGLGPGRLSAVKGLQ 435
SCG EGF+N KKG +A +G +RV V+GLGPGRLSA+ GL
Sbjct: 107 LAFASCGTEGFRNAKKGTGIAAQTAGIAAAARAKQKGVIHIRVVVKGLGPGRLSAMHGLI 166
Query: 436 MGGLNIVSITDNTHVSWN 489
MGGL ++SITDNT + N
Sbjct: 167 MGGLEVISITDNTPIPHN 184
>BC032378-1|AAH32378.1| 194|Homo sapiens mitochondrial ribosomal
protein S11 protein.
Length = 194
Score = 100 bits (240), Expect = 3e-21
Identities = 50/127 (39%), Positives = 72/127 (56%), Gaps = 2/127 (1%)
Frame = +1
Query: 115 TKQNLFPTL--ESDYQLYNGIPYKDLPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGF 288
TK +++P + E + G ++++PI +I+ SHNNT + + SCG EGF
Sbjct: 58 TKFSIYPPIPGEESSLRWAGKKFEEIPIAHIKASHNNTQIQVVSASNEPLAFASCGTEGF 117
Query: 289 KNTKKGXXXXXXXXXXXXXXKAVVQGYNTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITD 468
+N KKG +A +G +RV V+GLGPGRLSA+ GL MGGL ++SITD
Sbjct: 118 RNAKKGTGIAAQTAGIAAAARAKQKGVIHIRVVVKGLGPGRLSAMHGLIMGGLEVISITD 177
Query: 469 NTHVSWN 489
NT + N
Sbjct: 178 NTPIPHN 184
>BC012489-1|AAH12489.1| 193|Homo sapiens mitochondrial ribosomal
protein S11 protein.
Length = 193
Score = 100 bits (240), Expect = 3e-21
Identities = 50/127 (39%), Positives = 72/127 (56%), Gaps = 2/127 (1%)
Frame = +1
Query: 115 TKQNLFPTL--ESDYQLYNGIPYKDLPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGF 288
TK +++P + E + G ++++PI +I+ SHNNT + + SCG EGF
Sbjct: 57 TKFSIYPPIPGEESSLRWAGKKFEEIPIAHIKASHNNTQIQVVSASNEPLAFASCGTEGF 116
Query: 289 KNTKKGXXXXXXXXXXXXXXKAVVQGYNTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITD 468
+N KKG +A +G +RV V+GLGPGRLSA+ GL MGGL ++SITD
Sbjct: 117 RNAKKGTGIAAQTAGIAAAARAKQKGVIHIRVVVKGLGPGRLSAMHGLIMGGLEVISITD 176
Query: 469 NTHVSWN 489
NT + N
Sbjct: 177 NTPIPHN 183
>AK223152-1|BAD96872.1| 194|Homo sapiens mitochondrial ribosomal
protein S11 isoform a variant protein.
Length = 194
Score = 100 bits (240), Expect = 3e-21
Identities = 50/127 (39%), Positives = 72/127 (56%), Gaps = 2/127 (1%)
Frame = +1
Query: 115 TKQNLFPTL--ESDYQLYNGIPYKDLPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGF 288
TK +++P + E + G ++++PI +I+ SHNNT + + SCG EGF
Sbjct: 58 TKFSIYPPIPGEESSLRWAGKKFEEIPIAHIKASHNNTQIQVVSASNEPLAFASCGTEGF 117
Query: 289 KNTKKGXXXXXXXXXXXXXXKAVVQGYNTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITD 468
+N KKG +A +G +RV V+GLGPGRLSA+ GL MGGL ++SITD
Sbjct: 118 RNAKKGTGIAAQTAGIAAAARAKQKGVIHIRVVVKGLGPGRLSAMHGLIMGGLEVISITD 177
Query: 469 NTHVSWN 489
NT + N
Sbjct: 178 NTPIPHN 184
>AF320777-1|AAK97314.1| 193|Homo sapiens cervical cancer
proto-oncogene 2 protein.
Length = 193
Score = 100 bits (240), Expect = 3e-21
Identities = 50/127 (39%), Positives = 72/127 (56%), Gaps = 2/127 (1%)
Frame = +1
Query: 115 TKQNLFPTL--ESDYQLYNGIPYKDLPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGF 288
TK +++P + E + G ++++PI +I+ SHNNT + + SCG EGF
Sbjct: 57 TKFSIYPPIPGEESSLRWAGKKFEEIPIAHIKASHNNTQIQVVSASNEPLAFASCGTEGF 116
Query: 289 KNTKKGXXXXXXXXXXXXXXKAVVQGYNTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITD 468
+N KKG +A +G +RV V+GLGPGRLSA+ GL MGGL ++SITD
Sbjct: 117 RNAKKGTGIAAQTAGIAAAARAKQKGVIHIRVVVKGLGPGRLSAMHGLIMGGLEVISITD 176
Query: 469 NTHVSWN 489
NT + N
Sbjct: 177 NTPIPHN 183
>AB049944-1|BAB40997.1| 194|Homo sapiens mitochondrial ribosomal
protein S11 protein.
Length = 194
Score = 100 bits (240), Expect = 3e-21
Identities = 50/127 (39%), Positives = 72/127 (56%), Gaps = 2/127 (1%)
Frame = +1
Query: 115 TKQNLFPTL--ESDYQLYNGIPYKDLPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGF 288
TK +++P + E + G ++++PI +I+ SHNNT + + SCG EGF
Sbjct: 58 TKFSIYPPIPGEESSLRWAGKKFEEIPIAHIKASHNNTQIQVVSASNEPLAFASCGTEGF 117
Query: 289 KNTKKGXXXXXXXXXXXXXXKAVVQGYNTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITD 468
+N KKG +A +G +RV V+GLGPGRLSA+ GL MGGL ++SITD
Sbjct: 118 RNAKKGTGIAAQTAGIAAAARAKQKGVIHIRVVVKGLGPGRLSAMHGLIMGGLEVISITD 177
Query: 469 NTHVSWN 489
NT + N
Sbjct: 178 NTPIPHN 184
>BC009451-1|AAH09451.1| 160|Homo sapiens Unknown (protein for
IMAGE:3531918) protein.
Length = 160
Score = 78.6 bits (185), Expect = 1e-14
Identities = 37/74 (50%), Positives = 46/74 (62%)
Frame = +1
Query: 268 SCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGYNTVRVRVQGLGPGRLSAVKGLQMGGL 447
SCG EGF+N KKG +A +G +RV V+GLGPGRLSA+ GL MGGL
Sbjct: 77 SCGTEGFRNAKKGTGIAAQTAGIAAAARAKQKGVIHIRVVVKGLGPGRLSAMHGLIMGGL 136
Query: 448 NIVSITDNTHVSWN 489
++SITDNT + N
Sbjct: 137 EVISITDNTPIPHN 150
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.317 0.137 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,765,574
Number of Sequences: 237096
Number of extensions: 1403635
Number of successful extensions: 2609
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2609
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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