Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_P05
(579 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ062760-1|AAY56633.1| 200|Drosophila melanogaster mitochondria... 189 2e-48
AY095194-1|AAM12287.1| 200|Drosophila melanogaster RE01527p pro... 189 2e-48
AE014297-2304|AAF55385.1| 200|Drosophila melanogaster CG5184-PA... 189 2e-48
AY089696-1|AAL90434.1| 178|Drosophila melanogaster RH70248p pro... 151 9e-37
AY089583-1|AAL90321.1| 480|Drosophila melanogaster RE11624p pro... 29 6.0
AE014297-2656|AAF55663.2| 480|Drosophila melanogaster CG18493-P... 29 6.0
AE014297-2305|AAN13731.1| 91|Drosophila melanogaster CG5184-PB... 29 6.0
>DQ062760-1|AAY56633.1| 200|Drosophila melanogaster mitochondrial
ribosomal proteinS11 protein.
Length = 200
Score = 189 bits (461), Expect = 2e-48
Identities = 86/148 (58%), Positives = 109/148 (73%)
Frame = +1
Query: 52 IPAPDEGVQGEKIIDLDSALKTKQNLFPTLESDYQLYNGIPYKDLPICNIRVSHNNTIFT 231
+PA DEG GEK +D+D+ + K FP + L+NGIP+ +LPICNIRVS NNTI +
Sbjct: 45 LPAKDEGTVGEKTVDIDTLINRKAKFFPDASTANTLFNGIPFNELPICNIRVSPNNTIIS 104
Query: 232 LTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGYNTVRVRVQGLGPGR 411
+T+ G +R+IRSCG+EGFKNT+KG KA+ G+ TVRV+V+GLGPGR
Sbjct: 105 VTDHKGVLRLIRSCGIEGFKNTRKGTNIAAQATAVTISGKAIELGWKTVRVKVRGLGPGR 164
Query: 412 LSAVKGLQMGGLNIVSITDNTHVSWNPP 495
+SA+KGLQMGGLNIVSITDNTHVS+NPP
Sbjct: 165 MSAIKGLQMGGLNIVSITDNTHVSFNPP 192
>AY095194-1|AAM12287.1| 200|Drosophila melanogaster RE01527p
protein.
Length = 200
Score = 189 bits (461), Expect = 2e-48
Identities = 86/148 (58%), Positives = 109/148 (73%)
Frame = +1
Query: 52 IPAPDEGVQGEKIIDLDSALKTKQNLFPTLESDYQLYNGIPYKDLPICNIRVSHNNTIFT 231
+PA DEG GEK +D+D+ + K FP + L+NGIP+ +LPICNIRVS NNTI +
Sbjct: 45 LPAKDEGTVGEKTVDIDTLINRKAKFFPDASTANTLFNGIPFNELPICNIRVSPNNTIIS 104
Query: 232 LTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGYNTVRVRVQGLGPGR 411
+T+ G +R+IRSCG+EGFKNT+KG KA+ G+ TVRV+V+GLGPGR
Sbjct: 105 VTDHKGVLRLIRSCGIEGFKNTRKGTNIAAQATAVTISGKAIELGWKTVRVKVRGLGPGR 164
Query: 412 LSAVKGLQMGGLNIVSITDNTHVSWNPP 495
+SA+KGLQMGGLNIVSITDNTHVS+NPP
Sbjct: 165 MSAIKGLQMGGLNIVSITDNTHVSFNPP 192
>AE014297-2304|AAF55385.1| 200|Drosophila melanogaster CG5184-PA,
isoform A protein.
Length = 200
Score = 189 bits (461), Expect = 2e-48
Identities = 86/148 (58%), Positives = 109/148 (73%)
Frame = +1
Query: 52 IPAPDEGVQGEKIIDLDSALKTKQNLFPTLESDYQLYNGIPYKDLPICNIRVSHNNTIFT 231
+PA DEG GEK +D+D+ + K FP + L+NGIP+ +LPICNIRVS NNTI +
Sbjct: 45 LPAKDEGTVGEKTVDIDTLINRKAKFFPDASTANTLFNGIPFNELPICNIRVSPNNTIIS 104
Query: 232 LTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGYNTVRVRVQGLGPGR 411
+T+ G +R+IRSCG+EGFKNT+KG KA+ G+ TVRV+V+GLGPGR
Sbjct: 105 VTDHKGVLRLIRSCGIEGFKNTRKGTNIAAQATAVTISGKAIELGWKTVRVKVRGLGPGR 164
Query: 412 LSAVKGLQMGGLNIVSITDNTHVSWNPP 495
+SA+KGLQMGGLNIVSITDNTHVS+NPP
Sbjct: 165 MSAIKGLQMGGLNIVSITDNTHVSFNPP 192
>AY089696-1|AAL90434.1| 178|Drosophila melanogaster RH70248p
protein.
Length = 178
Score = 151 bits (365), Expect = 9e-37
Identities = 78/148 (52%), Positives = 98/148 (66%)
Frame = +1
Query: 52 IPAPDEGVQGEKIIDLDSALKTKQNLFPTLESDYQLYNGIPYKDLPICNIRVSHNNTIFT 231
+PA DEG GEK +D+D+ + +LPICNIRVS NNTI +
Sbjct: 45 LPAKDEGTVGEKTVDIDTLIN----------------------ELPICNIRVSPNNTIIS 82
Query: 232 LTEPDGKVRIIRSCGMEGFKNTKKGXXXXXXXXXXXXXXKAVVQGYNTVRVRVQGLGPGR 411
+T+ G +R+IRSCG+EGFKNT+KG KA+ G+ TVRV+V+GLGPGR
Sbjct: 83 VTDHKGVLRLIRSCGIEGFKNTRKGTNIAAQATAVTISGKAIELGWKTVRVKVRGLGPGR 142
Query: 412 LSAVKGLQMGGLNIVSITDNTHVSWNPP 495
+SA+KGLQMGGLNIVSITDNTHVS+NPP
Sbjct: 143 MSAIKGLQMGGLNIVSITDNTHVSFNPP 170
>AY089583-1|AAL90321.1| 480|Drosophila melanogaster RE11624p
protein.
Length = 480
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 461 SQITHMCHGIHQEQGKQGDCKSYCKYLLNYS 553
S I+++ G+ Q QG GD + YC YLL+++
Sbjct: 279 SSISNIFAGVAQYQGT-GDIEYYCDYLLSFN 308
>AE014297-2656|AAF55663.2| 480|Drosophila melanogaster CG18493-PA
protein.
Length = 480
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 461 SQITHMCHGIHQEQGKQGDCKSYCKYLLNYS 553
S I+++ G+ Q QG GD + YC YLL+++
Sbjct: 279 SSISNIFAGVAQYQGT-GDIEYYCDYLLSFN 308
>AE014297-2305|AAN13731.1| 91|Drosophila melanogaster CG5184-PB,
isoform B protein.
Length = 91
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 52 IPAPDEGVQGEKIIDLDSAL 111
+PA DEG GEK +D+D+ +
Sbjct: 45 LPAKDEGTVGEKTVDIDTLI 64
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.317 0.137 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,777,861
Number of Sequences: 53049
Number of extensions: 395763
Number of successful extensions: 1045
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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