Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_P05
         (579 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75552-5|CAA99938.1|  208|Caenorhabditis elegans Hypothetical pr...    97   6e-21
Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical p...    27   7.3  
Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical p...    27   7.3  
Z49909-5|CAD59140.1|  594|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z49909-4|CAA90108.1|  876|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AY303577-1|AAP57299.1|  876|Caenorhabditis elegans cell death-re...    27   9.6  

>Z75552-5|CAA99938.1|  208|Caenorhabditis elegans Hypothetical
           protein W04D2.5 protein.
          Length = 208

 Score = 97.5 bits (232), Expect = 6e-21
 Identities = 47/114 (41%), Positives = 71/114 (62%)
 Frame = +1

Query: 133 PTLESDYQLYNGIPYKDLPICNIRVSHNNTIFTLTEPDGKVRIIRSCGMEGFKNTKKGXX 312
           PT E+  Q ++G+ Y +LP+  IR S NNT+ T+ +   +V    SC +EGFKN +K   
Sbjct: 80  PTAETLKQQFDGVAYHELPLVYIRASKNNTLVTVMDNKNEVITSTSCRLEGFKNARKKTT 139

Query: 313 XXXXXXXXXXXXKAVVQGYNTVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNT 474
                       + V +G  TVRV+V+GLGPGR++ VKGL + G+++VSI+D+T
Sbjct: 140 IAGQTTGVAAGQRLVRRGIRTVRVQVKGLGPGRMTCVKGLTVAGVHVVSISDHT 193


>Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical
           protein C47E12.5b protein.
          Length = 1028

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +1

Query: 373 TVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
           T  V + GLG   +   K L +GG+  V+I D     W+
Sbjct: 40  TASVLISGLGSVGVEIAKNLILGGVRHVTIHDTKLAKWS 78


>Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical
           protein C47E12.5a protein.
          Length = 1113

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +1

Query: 373 TVRVRVQGLGPGRLSAVKGLQMGGLNIVSITDNTHVSWN 489
           T  V + GLG   +   K L +GG+  V+I D     W+
Sbjct: 125 TASVLISGLGSVGVEIAKNLILGGVRHVTIHDTKLAKWS 163


>Z49909-5|CAD59140.1|  594|Caenorhabditis elegans Hypothetical
           protein C14A4.4b protein.
          Length = 594

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 31  EKFVHKRIPAPDEGVQGEKIIDLDSALKTKQNLFPTLESDYQLYNGIP 174
           E+ + KR  A  + V  E+I+   + L  + N  P   +DY+LYN  P
Sbjct: 19  EEMIRKRTLAMRKKV--EEIMRNGAGLVRESNGLPKAGADYELYNSYP 64


>Z49909-4|CAA90108.1|  876|Caenorhabditis elegans Hypothetical
           protein C14A4.4a protein.
          Length = 876

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 31  EKFVHKRIPAPDEGVQGEKIIDLDSALKTKQNLFPTLESDYQLYNGIP 174
           E+ + KR  A  + V  E+I+   + L  + N  P   +DY+LYN  P
Sbjct: 19  EEMIRKRTLAMRKKV--EEIMRNGAGLVRESNGLPKAGADYELYNSYP 64


>AY303577-1|AAP57299.1|  876|Caenorhabditis elegans cell
           death-related nuclease 3 protein.
          Length = 876

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 31  EKFVHKRIPAPDEGVQGEKIIDLDSALKTKQNLFPTLESDYQLYNGIP 174
           E+ + KR  A  + V  E+I+   + L  + N  P   +DY+LYN  P
Sbjct: 19  EEMIRKRTLAMRKKV--EEIMRNGAGLVRESNGLPKAGADYELYNSYP 64


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.137    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,210,802
Number of Sequences: 27780
Number of extensions: 208128
Number of successful extensions: 527
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)