Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_P05
         (579 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   2.9  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    22   5.0  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    22   5.0  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   5.0  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    22   5.0  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   6.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   6.7  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   8.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.8  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 258 NHKIMRHGRIQEHQKRNQH 314
           NH   RH    ++Q  NQH
Sbjct: 428 NHNQARHSSKSDNQNNNQH 446


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 412 IALVPSLGLLLVQYYIP 362
           I  V S+G  L+Q YIP
Sbjct: 214 IQFVRSMGYYLIQIYIP 230


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 412 IALVPSLGLLLVQYYIP 362
           I  V S+G  L+Q YIP
Sbjct: 214 IQFVRSMGYYLIQIYIP 230


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 437 ICKPLTADNRPGPKPWTLTRTVLY 366
           IC  LTAD +PG   + +T  + Y
Sbjct: 644 ICTKLTADCQPGVTAFIVTSWLGY 667


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 412 IALVPSLGLLLVQYYIP 362
           I  V S+G  L+Q YIP
Sbjct: 153 IQFVRSMGYYLIQIYIP 169


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 151 YQLYNGIPYKDLPICNIR 204
           Y+ Y GIPY   P+   R
Sbjct: 45  YEAYEGIPYALPPVGKFR 62


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 151 YQLYNGIPYKDLPICNIR 204
           Y+ Y GIPY   P+   R
Sbjct: 45  YEAYEGIPYALPPVGKFR 62


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +2

Query: 455 FQSQITHMCHGIHQEQGKQGDCKSYCKYL 541
           F +    +   + +E GK+ DC +Y   L
Sbjct: 157 FNANARSVVEKMRKENGKEFDCHNYMSEL 185


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 431  KPLTADNRPGPKP 393
            +P TADN+P  KP
Sbjct: 1116 RPGTADNKPQLKP 1128


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.137    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,811
Number of Sequences: 438
Number of extensions: 3063
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)