Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_P03
         (687 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VEW3 Cluster: CG10311-PA; n=5; Endopterygota|Rep: CG1...    39   0.13 
UniRef50_Q16KE9 Cluster: Zinc finger protein; n=1; Aedes aegypti...    34   2.8  
UniRef50_Q9UL59 Cluster: Zinc finger protein 214; n=11; Eutheria...    33   4.9  
UniRef50_Q5C1T2 Cluster: SJCHGC07360 protein; n=1; Schistosoma j...    33   8.6  

>UniRef50_Q9VEW3 Cluster: CG10311-PA; n=5; Endopterygota|Rep:
           CG10311-PA - Drosophila melanogaster (Fruit fly)
          Length = 165

 Score = 38.7 bits (86), Expect = 0.13
 Identities = 32/158 (20%), Positives = 48/158 (30%)
 Frame = +1

Query: 211 LQKCCCCASTRTXXXXXXXXXXXXXXXXXXXXWTVKKHTVSFSTFIFDKEFDKKLSDLDI 390
           L  CC C STR                     +T + H   F T IFD          DI
Sbjct: 6   LNSCCLCQSTRNGSVISGILAIVLSIITIVVIFTTRVH---FKTIIFD------FIPNDI 56

Query: 391 PRXXXXXXXXXXXXXXXXXXVAINKRRSWLMLPWXXXXXXXXXXXXXXXXHTSITYYLDE 570
            +                  +   KR  +LM+PW                +T I +++D 
Sbjct: 57  VKIILVINLCMTILISLLMIIGALKRNHYLMVPWVVLGIMIAIGLLISVIYTGIVFFID- 115

Query: 571 HDHVIXATXXXXXXXXXXXXXXXXWAVVFSHYLDVRDE 684
             +V+                   W VV+S Y ++ +E
Sbjct: 116 -GYVLTGVLWLIFGLIVCAIMTYCWCVVYSEYANLSEE 152


>UniRef50_Q16KE9 Cluster: Zinc finger protein; n=1; Aedes
           aegypti|Rep: Zinc finger protein - Aedes aegypti
           (Yellowfever mosquito)
          Length = 719

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
 Frame = +3

Query: 258 HCYPRHHTFDSHNHIDMDCQE----THSLIQHIYL*QGIRQEAFRLRHSKDNFNN-KFMF 422
           H   +H    S      DC +      S   HIY  + I++E ++  H    F+N   + 
Sbjct: 398 HMRSKHENISSDGFTCDDCGQFFTNKRSFSTHIYKHRAIKEEKYKCEHCGKAFSNAALLT 457

Query: 423 HHLDLHTSDRRYK 461
            H+ +HT +R Y+
Sbjct: 458 RHVRIHTGERPYE 470


>UniRef50_Q9UL59 Cluster: Zinc finger protein 214; n=11;
           Eutheria|Rep: Zinc finger protein 214 - Homo sapiens
           (Human)
          Length = 606

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = +3

Query: 258 HCYPRHHTFDSHNHIDMDCQETHSLIQHIYL*QGIRQEAFRLRHSKDNFNNKFMFH-HLD 434
           H + R HT +    I+ D   + + + HI+    I ++ F+      +FN   + H H  
Sbjct: 319 HNHQRVHTEEKFYKIECDKDLSRNSLLHIHQRLHIGEKPFKCNQCGKSFNRSSVLHVHQR 378

Query: 435 LHTSDRRYK 461
           +HT ++ YK
Sbjct: 379 VHTGEKPYK 387


>UniRef50_Q5C1T2 Cluster: SJCHGC07360 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC07360 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 297

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +3

Query: 255 DHCYPRHHTFDSHNHIDMDCQETHSLIQHIYL*QGIRQEAFRLRHSKDNFNNKF--MFHH 428
           DH Y  HH    H+H+    Q+ H    +I +   +    F + +  DNF++ F  M + 
Sbjct: 51  DHHYHHHH----HHHLQEQQQQHHDHQNNITIDNDLTDTDFSITNDTDNFDSSFDAMMNS 106

Query: 429 LDLHT 443
           +D+ T
Sbjct: 107 IDITT 111


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,912,644
Number of Sequences: 1657284
Number of extensions: 10244248
Number of successful extensions: 21453
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21428
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)