Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_P03
         (687 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    25   0.68 
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   2.1  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   8.3  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = +3

Query: 159 YEIYYLSRKIISEQNEASSEMLLLCFYSDRIPDHCYPRHHTFDSHNHIDMDCQETH 326
           Y+I+  +R+I+ E+  A S +   C++ D  P     +H     +  ++ D Q  H
Sbjct: 223 YKIFCAARRIVLEERRAQSHLEAHCYF-DIEP--TVQQHQPVTVNRQLNSDVQPGH 275


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 684 FVTHVQVMAEYNCPKV 637
           +  H Q+MA YNC ++
Sbjct: 235 YYMHQQIMARYNCERL 250


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/39 (23%), Positives = 18/39 (46%)
 Frame = -1

Query: 543 VKDTDQQADCQNDTQHYPRQHQP*PTLVYSDDQKCANQD 427
           + D + + D Q   +H PR  Q     +++  +   N+D
Sbjct: 68  ILDKNAEVDVQKALRHLPRSMQDSTKKLFNKCKSIQNED 106


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,012
Number of Sequences: 438
Number of extensions: 3177
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)