Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_O24
(683 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117195-22|CAB55034.1| 119|Caenorhabditis elegans Hypothetical... 77 9e-15
AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like rec... 31 1.0
AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosoph... 31 1.0
AL110478-3|CAB54348.1| 380|Caenorhabditis elegans Hypothetical ... 29 3.1
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 28 5.4
AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical ... 28 5.4
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 5.4
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 5.4
AF003383-3|ABO16467.1| 438|Caenorhabditis elegans Cyclophylin p... 28 5.4
AC084160-4|AAK39374.1| 240|Caenorhabditis elegans Hypothetical ... 28 5.4
AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical ... 28 7.1
AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical... 28 7.1
Z35663-2|CAA84735.2| 335|Caenorhabditis elegans Hypothetical pr... 27 9.4
>AL117195-22|CAB55034.1| 119|Caenorhabditis elegans Hypothetical
protein Y57A10A.29 protein.
Length = 119
Score = 77.4 bits (182), Expect = 9e-15
Identities = 33/83 (39%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +3
Query: 276 QPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSNDWDIFY 455
+ ++ ++ARL YQS+KRG+LEND+LL FA++ L +E + YD+LIN +WD+FY
Sbjct: 27 EKIDAKRARLLYQSKKRGILENDILLGDFAEQNLKKMSEPELKAYDKLINGEHMEWDLFY 86
Query: 456 WIVEKKPTPKEFDN-EIMNLLKK 521
++ KK P++ ++ ++ +KK
Sbjct: 87 YLSNKKSPPEDVESCQVYQKVKK 109
>AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like
receptor TOL-1 protein.
Length = 1221
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +3
Query: 159 LNLSYNALKNVQKVAFXSNTTNNMDTTYMEIPLYDVEKQQPLEKRKARLHYQSRKRGMLE 338
LN+S N ++ F S +D +Y ++ VE Q EKR A LH + L
Sbjct: 287 LNVSRNEIEAGNSSVFSSPELEMLDASYNKLDSLPVEWLQKCEKRIAHLHLEHNSIEQLT 346
Query: 339 NDLL 350
+L
Sbjct: 347 GGVL 350
>AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll
(drosophila) family protein 1 protein.
Length = 1221
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +3
Query: 159 LNLSYNALKNVQKVAFXSNTTNNMDTTYMEIPLYDVEKQQPLEKRKARLHYQSRKRGMLE 338
LN+S N ++ F S +D +Y ++ VE Q EKR A LH + L
Sbjct: 287 LNVSRNEIEAGNSSVFSSPELEMLDASYNKLDSLPVEWLQKCEKRIAHLHLEHNSIEQLT 346
Query: 339 NDLL 350
+L
Sbjct: 347 GGVL 350
>AL110478-3|CAB54348.1| 380|Caenorhabditis elegans Hypothetical
protein Y26D4A.8 protein.
Length = 380
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/82 (19%), Positives = 38/82 (46%)
Frame = +3
Query: 93 RLSLSKIDKNNMNLIKMLHTRTLNLSYNALKNVQKVAFXSNTTNNMDTTYMEIPLYDVEK 272
++ + + +KN+ +++K LH + N N+ A S ++ E ++ +K
Sbjct: 50 KMEILEREKNSQDMLKQLHEDKKEMEGNIQSNIN--AMKSENLQYQTQSHQEKKVFAEKK 107
Query: 273 QQPLEKRKARLHYQSRKRGMLE 338
Q L++ A+L + + +E
Sbjct: 108 LQKLKENGAKLSLEIQSTSAIE 129
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +3
Query: 273 QQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSNDW--- 443
Q E ++ HY+ R + ML++++ + L EK + L N+
Sbjct: 690 QSEQEMKQLEAHYE-RAQKMLQDNVEQMNVENRGLRDEIEKLSQQMAALPRGGLNEQQLH 748
Query: 444 DIFYWIVEKKPTPKEFDN 497
+IF W+ E+K T +E +N
Sbjct: 749 EIFNWVSEEKATREEMEN 766
>AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical
protein Y87G2A.5 protein.
Length = 1050
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 318 RKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLIN-SPSNDWDIFYWIVEKK 473
R+RG+ +DL F ++ + NEK ++YD+ S DWD + ++ K
Sbjct: 181 RERGLTRHDLGRDRFNQEVWHWKNEKGDVIYDQFRKLGASVDWDRAVFTMDPK 233
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 483 KEFDNEIMNLLKKHAKNEDKIALRQP 560
K F E+ +L KKH K D I +QP
Sbjct: 1142 KRFQKELDDLRKKHQKQRDSIQKQQP 1167
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 483 KEFDNEIMNLLKKHAKNEDKIALRQP 560
K F E+ +L KKH K D I +QP
Sbjct: 1142 KRFQKELDDLRKKHQKQRDSIQKQQP 1167
>AF003383-3|ABO16467.1| 438|Caenorhabditis elegans Cyclophylin
protein 17 protein.
Length = 438
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 366 KKYLNGFNEKQTMMYDRLINSPSNDWDIFYWIVEKKPTPK--EFDNEIMNLLKKHAKNE 536
KK +N F +K T + + + +N WD F + KPTPK F +M+ K ++E
Sbjct: 262 KKVVNTFRQKPTPAPE-VTTTKANIWDKFTVGNKAKPTPKYIPFWQRLMSTTSKPIEDE 319
>AC084160-4|AAK39374.1| 240|Caenorhabditis elegans Hypothetical
protein Y73B3B.2 protein.
Length = 240
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 462 VEKKPTPKEFDNEIMNLLKKHAKNEDKIALRQP 560
+ KP+ +FD+E MNLLK N+ KI P
Sbjct: 193 INPKPSQPQFDDEQMNLLKS-IINQSKIVSMMP 224
>AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 462 VEKKPTPKEFDNEIMNLLKKHAKNEDKIALRQP 560
+ KP+ +FD+E MNLLK N+ KI P
Sbjct: 29 INPKPSQPQFDDEQMNLLKS-IINQSKIVPMMP 60
>AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 462 VEKKPTPKEFDNEIMNLLKKHAKNEDKIALRQP 560
+ KP+ +FD+E MNLLK N+ KI P
Sbjct: 29 INPKPSQPQFDDEQMNLLKS-IINQSKIVPMMP 60
>Z35663-2|CAA84735.2| 335|Caenorhabditis elegans Hypothetical
protein T04A8.2 protein.
Length = 335
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -1
Query: 530 FSMFFEKIHNFIVKFFRSWLLFNYPIEYVPIVAG*VYETIVHHSLFFIKTIQILL 366
FSM F I + +F P+ Y P++ + ++HHS IQILL
Sbjct: 78 FSMIFLDIIGRTLVYFTPLCPIIAPMFYEPLIGFKIMMIVLHHSRACKSLIQILL 132
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,612,881
Number of Sequences: 27780
Number of extensions: 308309
Number of successful extensions: 993
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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