Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_O21
         (609 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g09430.1 68416.m01120 hypothetical protein                          30   1.4  
At3g58480.1 68416.m06518 calmodulin-binding family protein conta...    29   3.2  
At5g63020.1 68418.m07906 disease resistance protein (CC-NBS-LRR ...    28   4.2  
At3g16620.1 68416.m02124 chloroplast outer membrane protein, put...    28   4.2  
At5g58980.1 68418.m07389 ceramidase family protein contains Pfam...    28   5.6  
At2g48070.2 68415.m06017 expressed protein                             28   5.6  
At2g48070.1 68415.m06016 expressed protein                             28   5.6  
At4g27110.1 68417.m03896 phytochelatin synthetase-related contai...    27   9.7  

>At3g09430.1 68416.m01120 hypothetical protein
          Length = 247

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +2

Query: 341 PDYPESPLPISQPS-TGKLIEILNEDPNVHYMDGICEGSSR 460
           P+Y   P P+S PS   K+++I N +PN+    G+ E S+R
Sbjct: 51  PNYNSPPTPVSYPSPQSKILQIPNRNPNLG--RGLNEESNR 89


>At3g58480.1 68416.m06518 calmodulin-binding family protein contains
           Pfam profile PF00612: IQ calmodulin-binding motif
          Length = 575

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
 Frame = +2

Query: 188 ENLQYTISDIQHRNYLFSQEQETPVKEK-KLTAGIFVMPSRHKQTEDDYRNRPDYPESPL 364
           EN Q  +S ++  N   +  ++ P +E  +  A +  MPSR K+TE+++ +  D      
Sbjct: 339 ENFQAFMSFLRENNVDLANVKKNPDEEDGEAPAKVKRMPSRIKETEEEHCDFVDAETGFS 398

Query: 365 PISQPSTGKLIEILN 409
           P ++P+    ++ L+
Sbjct: 399 PNTKPNNHAELQTLS 413


>At5g63020.1 68418.m07906 disease resistance protein (CC-NBS-LRR
           class), putative domain signature CC-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 888

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +2

Query: 134 LVIVWIAYCMFIRERAKSENLQYTISDIQHRNYLFSQEQETPVK 265
           LV  WI      R + K+EN  Y I  I  R+ L  +E +  VK
Sbjct: 427 LVDYWIGEGFIDRNKGKAENQGYEIIGILVRSCLLMEENQETVK 470


>At3g16620.1 68416.m02124 chloroplast outer membrane protein,
           putative similar to chloroplast protein import component
           Toc159 [Pisum sativum] GI:8489806, chloroplast outer
           envelope protein 86 [Pisum sativum] GI:599958,
           GTP-binding protein [Pisum sativum] GI:576509
          Length = 1089

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
 Frame = +2

Query: 179 AKSENLQYTISDIQHRNYLFSQEQETPVKE-----KKLTAGIFVMPSRHKQTEDDYRNRP 343
           +KS+  +Y + ++++R  LF + Q    ++     KK  A I  MP+ + +  ++ R+ P
Sbjct: 753 SKSQKKEY-LDEMEYREKLFMKRQMKEERKRRKLLKKFAAEIKDMPNGYSENVEEERSEP 811

Query: 344 DYPESPLP-ISQPST 385
                P+P +S P++
Sbjct: 812 ASVPVPMPDLSLPAS 826


>At5g58980.1 68418.m07389 ceramidase family protein contains Pfam
           domain, PF04734: Neutral/alkaline nonlysosomal
           ceramidase
          Length = 733

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 505 LTQWHMNCTCYLHLPRLLRLKCTF 576
           +T+W M+  C L L  LLRL C F
Sbjct: 1   MTRWSMSMHCTLFLLFLLRLTCIF 24


>At2g48070.2 68415.m06017 expressed protein
          Length = 197

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +2

Query: 317 TEDDYRNRPDYPESPLPISQPSTGK-LIEILNE 412
           T D    + D PESPLP S  + GK L +++N+
Sbjct: 34  TSDGLEPKDDPPESPLPSSSSALGKDLKKVVNK 66


>At2g48070.1 68415.m06016 expressed protein
          Length = 197

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +2

Query: 317 TEDDYRNRPDYPESPLPISQPSTGK-LIEILNE 412
           T D    + D PESPLP S  + GK L +++N+
Sbjct: 34  TSDGLEPKDDPPESPLPSSSSALGKDLKKVVNK 66


>At4g27110.1 68417.m03896 phytochelatin synthetase-related contains
           Pfam PF04833: Phytochelatin synthetase-like conserved
           region
          Length = 668

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = -2

Query: 365 AADSQGNP--VCCGNRPRFAYGAKASRKF-PQSASSLSPEFLALERTDSSY 222
           AA S+G    VCC   P+F    K   KF P+    L+  +  L+   SSY
Sbjct: 185 AATSKGGTMQVCCKRNPKFKAKEKVKTKFMPRQHGDLNIIYDVLQAYASSY 235


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,019,437
Number of Sequences: 28952
Number of extensions: 268875
Number of successful extensions: 652
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1216725696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)