Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_O15
         (608 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    24   1.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   1.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   2.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   2.3  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   3.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   4.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   5.4  

>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 336 DSIGIHRLRTTPGXLGSI 389
           D+ G+H L   PG LG I
Sbjct: 327 DTCGVHNLHGMPGILGGI 344


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = +1

Query: 163 TPTQVKDQPSVTFEAEADAFYTLVFTDPDNYDGPELVYREWHHWLVGNI 309
           TP  ++   S+    +  A   L+ +DP        VY +W HW   N+
Sbjct: 829 TPNLLRYFASIATNPKEQAQLNLLASDP-------AVYEDWRHWKFPNL 870


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -1

Query: 368 GGPEPMYPDRVSPAERSPPGMFPTSQWCH 282
           G  + +Y +   PA+R+P    P   W H
Sbjct: 101 GAEDCLYLNVYVPADRTPSQSLPVIFWIH 129


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -1

Query: 368 GGPEPMYPDRVSPAERSPPGMFPTSQWCH 282
           G  + +Y +   PA+R+P    P   W H
Sbjct: 101 GAEDCLYLNVYVPADRTPSQSLPVIFWIH 129


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = +2

Query: 383 IHRYVYIL--YKQPGKLDFDEKRLTN 454
           IHR VY    Y+QP + D   KR+TN
Sbjct: 339 IHRLVYFQNEYEQPSEEDL--KRITN 362


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 63  FECLCYQRHDYSANLTTI 10
           +E  CY R+D + N T I
Sbjct: 456 YEVRCYPRYDDATNATVI 473


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +3

Query: 333 RDSIGIHRLRTTPGXLGSIVTST 401
           ++ +G+  ++  PG  G+  TST
Sbjct: 164 KEQLGLASVKAEPGSTGTTTTST 186


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,488
Number of Sequences: 438
Number of extensions: 3763
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)