Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_O15
(608 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g18100.1 68414.m02244 mother of FT and TF1 protein (MFT) iden... 67 7e-12
At5g62040.1 68418.m07787 brother of FT and TFL1 protein (BFT) id... 55 3e-08
At5g03840.1 68418.m00354 terminal flower 1 protein (TFL1) identi... 53 2e-07
At2g27550.1 68415.m03338 centroradialis protein, putative (CEN) ... 52 2e-07
At1g65480.1 68414.m07429 flowering locus T protein (FT) identica... 48 4e-06
At4g20370.1 68417.m02973 twin sister of FT protein (TSF) / TFL1 ... 46 1e-05
At5g51300.2 68418.m06360 splicing factor-related contains simila... 29 2.4
At5g51300.1 68418.m06359 splicing factor-related contains simila... 29 2.4
At4g13190.1 68417.m02051 protein kinase family protein similar t... 28 4.2
At5g05180.2 68418.m00552 expressed protein 27 9.7
At5g05180.1 68418.m00551 expressed protein 27 9.7
>At1g18100.1 68414.m02244 mother of FT and TF1 protein (MFT)
identical to SP|Q9XFK7 MOTHER of FT and TF1 protein
{Arabidopsis thaliana}; contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 173
Score = 67.3 bits (157), Expect = 7e-12
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Frame = +1
Query: 70 KIVPDVIPV-APTKNIELKYPSGAIASQGNELTPTQVKDQPSVTFEAEADAFYTLVFTDP 246
+++ DV+ + PT N+ + + I + G E+ P+ + P V +D YTLV TDP
Sbjct: 12 RVIGDVLDMFIPTANMSVYFGPKHITN-GCEIKPSTAVNPPKVNISGHSDELYTLVMTDP 70
Query: 247 DNYDGPELVYREWHHWLVGNIPGG-DLSAGETLSGYIGSGPPQG 375
D E REW HW+V +IPGG + S G+ + Y+ PP G
Sbjct: 71 DAPSPSEPNMREWVHWIVVDIPGGTNPSRGKEILPYMEPRPPVG 114
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/57 (40%), Positives = 34/57 (59%)
Frame = +2
Query: 380 GIHRYVYILYKQPGKLDFDEKRLTNTSIDSRASFSTKKFAEKYNLGAPVAGNFYRAQ 550
GIHRY+ +L++Q + L SRA+FST+ FA ++LG PVA ++ AQ
Sbjct: 114 GIHRYILVLFRQNSPVG-----LMVQQPPSRANFSTRMFAGHFDLGLPVATVYFNAQ 165
>At5g62040.1 68418.m07787 brother of FT and TFL1 protein (BFT)
identical to SP|Q9FIT4 BROTHER of FT and TFL1 protein
{Arabidopsis thaliana}; contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 177
Score = 55.2 bits (127), Expect = 3e-08
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Frame = +1
Query: 37 MSLVAQAFEASKIVPDVIPVA-PTKNIELKYPSGAIASQGNELTPTQVKDQPSVTFEAE- 210
MS + +++ DV+ + P+ + + + S I S G+EL P+ + +P V +
Sbjct: 1 MSREIEPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQD 60
Query: 211 ADAFYTLVFTDPDNYDGPELVYREWHHWLVGNIPG-GDLSAGETLSGYIGSGPPQG 375
+F+TL+ DPD RE+ HW+V +IPG D S G + Y P G
Sbjct: 61 LRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAG 116
Score = 40.7 bits (91), Expect = 7e-04
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +2
Query: 380 GIHRYVYILYKQPGKLDFDEKRLTNTSIDSRASFSTKKFAEKYNLGAPVAGNFYRAQ 550
GIHRYV+ L+KQ G ++ + ++R F+T F+ + L PVA ++ AQ
Sbjct: 116 GIHRYVFALFKQRG------RQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQ 166
>At5g03840.1 68418.m00354 terminal flower 1 protein (TFL1) identical
go SP|P93003 TERMINAL FLOWER 1 protein {Arabidopsis
thaliana}; contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 177
Score = 52.8 bits (121), Expect = 2e-07
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Frame = +1
Query: 70 KIVPDVIPV-APTKNIELKYPSGAIASQGNELTPTQVKDQPSVTFEA-EADAFYTLVFTD 243
++V DV+ PT + + Y + S G+EL P+ V +P V + +F+TLV D
Sbjct: 16 RVVGDVLDFFTPTTKMNVSYNKKQV-SNGHELFPSSVSSKPRVEIHGGDLRSFFTLVMID 74
Query: 244 PDNYDGPELVYREWH-HWLVGNIPG-GDLSAGETLSGY 351
PD GP + + H HW+V NIPG D + G+ + Y
Sbjct: 75 PD-VPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSY 111
Score = 52.0 bits (119), Expect = 3e-07
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = +2
Query: 368 PRXT-GIHRYVYILYKQPGKLDFDEKRLTNTSIDSRASFSTKKFAEKYNLGAPVAGNFYR 544
PR + GIHR+V++L++Q ++R+ +I SR F+T+KFA +Y+LG PVA F+
Sbjct: 114 PRPSIGIHRFVFVLFRQK------QRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFN 167
Query: 545 AQ 550
AQ
Sbjct: 168 AQ 169
>At2g27550.1 68415.m03338 centroradialis protein, putative (CEN)
strong similarity to SP|Q41261 CENTRORADIALIS protein
{Antirrhinum majus}; contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 175
Score = 52.4 bits (120), Expect = 2e-07
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Frame = +1
Query: 70 KIVPDVIP-VAPTKNIELKYPSGAIASQGNELTPTQVKDQPSVTFEA-EADAFYTLVFTD 243
+++ DV+ + + Y S G+EL P+ V +P V + +F+TLV TD
Sbjct: 13 RVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGGDMRSFFTLVMTD 72
Query: 244 PDNYDGPELVY-REWHHWLVGNIPG-GDLSAGETLSGY 351
PD GP Y RE HW+V +IPG D+S G+ + GY
Sbjct: 73 PD-VPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGY 109
Score = 42.3 bits (95), Expect = 2e-04
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +2
Query: 380 GIHRYVYILYKQPGKLDFDEKRLTNTSIDS-RASFSTKKFAEKYNLGAPVAGNFYRAQ 550
GIHR+VY+L+KQ +R + S+ S R F+T++FA + +LG PVA F+ Q
Sbjct: 117 GIHRFVYLLFKQT-------RRGSVVSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQ 167
>At1g65480.1 68414.m07429 flowering locus T protein (FT) identical
to SP|Q9SXZ2 FLOWERING LOCUS T protein {Arabidopsis
thaliana}; contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 175
Score = 48.4 bits (110), Expect = 4e-06
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 362 DHPRXT-GIHRYVYILYKQPGKLDFDEKRLTNTSIDSRASFSTKKFAEKYNLGAPVAGNF 538
++P T GIHR V+IL++Q G R T + R +F+T++FAE YNLG PVA F
Sbjct: 109 ENPSPTAGIHRVVFILFRQLG-------RQTVYAPGWRQNFNTREFAEIYNLGLPVAAVF 161
Query: 539 YRAQ 550
Y Q
Sbjct: 162 YNCQ 165
Score = 48.0 bits (109), Expect = 5e-06
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = +1
Query: 67 SKIVPDVIPVAPTKNIELKYPSGAI-ASQGNELTPTQVKDQPSVTFEAE-ADAFYTLVFT 240
S++V DV+ ++I LK G + G +L P+QV+++P V E FYTLV
Sbjct: 12 SRVVGDVLDPF-NRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFYTLVMV 70
Query: 241 DPDNYDGPELVYREWHHWLVGNIP 312
DPD RE+ HWLV +IP
Sbjct: 71 DPDVPSPSNPHLREYLHWLVTDIP 94
>At4g20370.1 68417.m02973 twin sister of FT protein (TSF) / TFL1
like protein identical to SP|Q9S7R5 TWIN SISTER of FT
protein (TFL1 like protein) {Arabidopsis thaliana};
contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 175
Score = 46.4 bits (105), Expect = 1e-05
Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Frame = +1
Query: 73 IVPDVIPVAPTKNIELKYPSG-AIASQGNELTPTQVKDQPSVTFEAEADA-FYTLVFTDP 246
+V DV+ T+ + LK G + G +L P+QV ++P V + FYTLV DP
Sbjct: 14 VVGDVLDPF-TRLVSLKVTYGHREVTNGLDLRPSQVLNKPIVEIGGDDFRNFYTLVMVDP 72
Query: 247 DNYDGPELVYREWHHWLVGNIPGGDLSA-GETLSGYIGSGPPQG 375
D RE+ HWLV +IP +A G + Y PP G
Sbjct: 73 DVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSG 116
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 362 DHPRX-TGIHRYVYILYKQPGKLDFDEKRLTNTSIDSRASFSTKKFAEKYNLGAPVAGNF 538
+ PR +GIHR V +L++Q G R T + R F+T++FAE YNLG PVA ++
Sbjct: 109 ESPRPPSGIHRIVLVLFRQLG-------RQTVYAPGWRQQFNTREFAEIYNLGLPVAASY 161
Query: 539 YRAQ 550
+ Q
Sbjct: 162 FNCQ 165
>At5g51300.2 68418.m06360 splicing factor-related contains
similarity to SF1 protein [Drosophila melanogaster]
GI:6687400
Length = 804
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 374 PWGGPEPMYPDRVSPAERSPPGMFPTSQW 288
P G P P P + P PPG +P+ Q+
Sbjct: 565 PPGPPAPQPPTQGYPPSNQPPGAYPSQQY 593
>At5g51300.1 68418.m06359 splicing factor-related contains
similarity to SF1 protein [Drosophila melanogaster]
GI:6687400
Length = 804
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 374 PWGGPEPMYPDRVSPAERSPPGMFPTSQW 288
P G P P P + P PPG +P+ Q+
Sbjct: 565 PPGPPAPQPPTQGYPPSNQPPGAYPSQQY 593
>At4g13190.1 68417.m02051 protein kinase family protein similar to
serine/threonine kinase BNK1 [Brassica napus]
gi|10445209|gb|AAG16628; contains protein kinase domain,
Pfam:PF00069
Length = 405
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +1
Query: 73 IVPDVIPVAPTKNIELKYPSGAIASQGNELTPTQVKDQPSVTFEAEADAFYTL 231
++ DV+ + E PSG + N L+P V+DQ + E+ D + L
Sbjct: 353 LISDVVTALSFMSTETGSPSGLTGTALNPLSPKTVEDQGWLQCESPRDVYSLL 405
>At5g05180.2 68418.m00552 expressed protein
Length = 408
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2
Query: 577 VKLWDVVVELRSVEVAGDRRPQVVLFSEFLRGER 476
+KL + E+ ++ +++ VVLF E+LRGER
Sbjct: 117 LKLQEFEQEIEKLKET-EKKESVVLFGEYLRGER 149
>At5g05180.1 68418.m00551 expressed protein
Length = 432
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2
Query: 577 VKLWDVVVELRSVEVAGDRRPQVVLFSEFLRGER 476
+KL + E+ ++ +++ VVLF E+LRGER
Sbjct: 117 LKLQEFEQEIEKLKET-EKKESVVLFGEYLRGER 149
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,715,713
Number of Sequences: 28952
Number of extensions: 257067
Number of successful extensions: 773
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1216725696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -