Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_O13
         (749 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q67M38 Cluster: Putative uncharacterized protein; n=1; ...    34   4.3  
UniRef50_A2CBU6 Cluster: Predicted amidophosphoribosyltransferas...    33   7.5  
UniRef50_A7ASN5 Cluster: Putative uncharacterized protein; n=1; ...    33   7.5  

>UniRef50_Q67M38 Cluster: Putative uncharacterized protein; n=1;
           Symbiobacterium thermophilum|Rep: Putative
           uncharacterized protein - Symbiobacterium thermophilum
          Length = 186

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 177 LPLCSCAGATWIALSLLHLFSSGWTSGNMK 266
           LP C C G+TW    ++H    GW S N +
Sbjct: 53  LPNCRCYGSTWTTNRVMHSARCGWASANRR 82


>UniRef50_A2CBU6 Cluster: Predicted amidophosphoribosyltransferase;
           n=2; Prochlorococcus marinus|Rep: Predicted
           amidophosphoribosyltransferase - Prochlorococcus marinus
           (strain MIT 9303)
          Length = 208

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 412 LPLRGFLGLSPPRWPSAGWWITHLRK 489
           LP  G  GLSP  W + GW+  HLR+
Sbjct: 31  LPADGLRGLSPLNWRTLGWYEGHLRR 56


>UniRef50_A7ASN5 Cluster: Putative uncharacterized protein; n=1;
           Babesia bovis|Rep: Putative uncharacterized protein -
           Babesia bovis
          Length = 858

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +2

Query: 164 IHTCLAFVFLCWSYLDSFVITTPIFKWLDIWKYEIMLAISNKRIVCKYI 310
           +HTC A + +C     SFV+T   +    IW   +    S+ RI  KY+
Sbjct: 497 LHTCSALLMMCAYGFSSFVLTAIFY----IWNQNVKFEFSHIRIFVKYL 541


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,729,837
Number of Sequences: 1657284
Number of extensions: 12370265
Number of successful extensions: 24099
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24098
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)