Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_O13
         (749 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.6  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   3.4  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   3.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   6.0  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   6.0  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   8.0  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 146 IYQNFIQERQIDSYLIEYPCRIELRR 69
           I  N +++  + + L+E PC I +RR
Sbjct: 567 ILDNKVEKVVVSNRLVESPCCITMRR 592


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 89  CRIELRRKVYSYSLLDFILVAVSV 18
           CRI +  +++   L  FILV +SV
Sbjct: 126 CRIMMFFRMFGLYLSSFILVCISV 149


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 89  CRIELRRKVYSYSLLDFILVAVSV 18
           CRI +  +++   L  FILV +SV
Sbjct: 126 CRIMMFFRMFGLYLSSFILVCISV 149


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -1

Query: 437 RPKNPLNGSEGQCPARVYIIW 375
           R  +  NG+   CP+R + +W
Sbjct: 336 RMPHKCNGNAHNCPSRSHPVW 356


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -1

Query: 437 RPKNPLNGSEGQCPARVYIIW 375
           R  +  NG+   CP+R + +W
Sbjct: 343 RMPHKCNGNAHNCPSRSHPVW 363


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = -3

Query: 246 SHLKIGVVMTKLSK*LQHRNTKARQVCIATSPLNISKFHTGTTD 115
           S L+   ++    K LQ+   +   +  AT P  +SKF  G ++
Sbjct: 73  SKLEKADILEMTVKHLQNLQRQQAAMSAATDPSVVSKFRAGFSE 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,476
Number of Sequences: 336
Number of extensions: 3425
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)