SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_O12
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.9  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   4.4  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    22   4.4  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    22   5.8  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.7  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.7  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   7.7  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   7.7  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 232 FQLNPTKGSVSFPNQSPFSFRF 167
           F L P+K +++ PN     FRF
Sbjct: 638 FNLPPSKDTIAVPNNGYVIFRF 659


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 177 ENGDWLGNETDPLVGFSWK 233
           +NGD    E +PL+  +WK
Sbjct: 473 KNGDPNPTEENPLINVTWK 491


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 177 ENGDWLGNETDPLVGFSWK 233
           +NGD    E +PL+  +WK
Sbjct: 473 KNGDPNPTEENPLINVTWK 491


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +3

Query: 177 ENGDWLGNETDPLVGFSWKGGFQRHTGIL 263
           +NGD    E  PL+  +WK   Q     L
Sbjct: 473 KNGDPNPKEKTPLINVTWKPVTQNEMNFL 501


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 308 LFSCCCSGDKWLRIH 264
           L SC C   KW+R++
Sbjct: 97  LNSCFCDPAKWIRLN 111


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 308 LFSCCCSGDKWLRIH 264
           L SC C   KW+R++
Sbjct: 97  LNSCFCDPAKWIRLN 111


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 417 YNLIGNLQEDDLQWLQLFTE 476
           Y +I N Q  D+ W+  FT+
Sbjct: 302 YQIIKNQQVYDVPWIASFTK 321


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 417 YNLIGNLQEDDLQWLQLFTE 476
           Y +I N Q  D+ W+  FT+
Sbjct: 302 YQIIKNKQVYDVPWIASFTK 321


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,769
Number of Sequences: 336
Number of extensions: 3666
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -