Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_O12
(728 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative guan... 253 1e-67
AC024817-8|AAU05551.1| 535|Caenorhabditis elegans Hypothetical ... 253 1e-67
AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical ... 253 1e-67
Z95559-2|CAB09000.3| 520|Caenorhabditis elegans Hypothetical pr... 184 6e-47
AC091125-1|AAK27889.2| 313|Caenorhabditis elegans Hypothetical ... 30 1.5
Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical pr... 28 5.9
>AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative
guanylate-binding protein protein.
Length = 573
Score = 253 bits (619), Expect = 1e-67
Identities = 128/243 (52%), Positives = 161/243 (66%), Gaps = 8/243 (3%)
Frame = +3
Query: 6 NHNYVLEXNALQRILLREDVKDLPLMVVSVVGAYRGGKSFLLNYFLRYLN--SPTEK--- 170
+H++ L L++ILL V D + V+ V GAYR GKSFLLN+FLRYL S +K
Sbjct: 43 DHSFELNTELLEKILLDPKVADKKVAVIGVAGAYRKGKSFLLNFFLRYLTWRSKADKVMG 102
Query: 171 --RNENGDWLGNETDPLVGFSWKGGFQRHT-GILMYSEPFITTTATGEKVAVLLMDTPGL 341
+N W+ + PL GFSW+GG +R T GIL++SEPFI GE++AVLLMDT G
Sbjct: 103 EVELDNSQWM-SPNSPLSGFSWRGGSERDTNGILIWSEPFIMKDKNGEEIAVLLMDTQGA 161
Query: 342 FDPNSTVRDSSIIFALSTLISSVQIYNLIGNLQEDDLQWLQLFTEYGKLLKNEDGSKAFQ 521
FD STV+D + IFALST+ISSVQIYNL N+QEDDLQ LQLFTEYG+L + SK FQ
Sbjct: 162 FDSQSTVKDCATIFALSTMISSVQIYNLSQNIQEDDLQHLQLFTEYGRLALEDSASKPFQ 221
Query: 522 MLMFLIRDWFYPYEHAFXXXXXXXXXXXXXXITDKMPKELCDLREHIRSCFDKVSCFLMP 701
L+FL+RDW +PYE F +++K EL LR+HIRSCF+ + CFLMP
Sbjct: 222 SLLFLVRDWSFPYEAEFGFQGGQRVLDRRLEVSEKQHAELQQLRQHIRSCFEDIRCFLMP 281
Query: 702 HPG 710
HPG
Sbjct: 282 HPG 284
>AC024817-8|AAU05551.1| 535|Caenorhabditis elegans Hypothetical
protein Y54G2A.2b protein.
Length = 535
Score = 253 bits (619), Expect = 1e-67
Identities = 128/243 (52%), Positives = 161/243 (66%), Gaps = 8/243 (3%)
Frame = +3
Query: 6 NHNYVLEXNALQRILLREDVKDLPLMVVSVVGAYRGGKSFLLNYFLRYLN--SPTEK--- 170
+H++ L L++ILL V D + V+ V GAYR GKSFLLN+FLRYL S +K
Sbjct: 43 DHSFELNTELLEKILLDPKVADKKVAVIGVAGAYRKGKSFLLNFFLRYLTWRSKADKVMG 102
Query: 171 --RNENGDWLGNETDPLVGFSWKGGFQRHT-GILMYSEPFITTTATGEKVAVLLMDTPGL 341
+N W+ + PL GFSW+GG +R T GIL++SEPFI GE++AVLLMDT G
Sbjct: 103 EVELDNSQWM-SPNSPLSGFSWRGGSERDTNGILIWSEPFIMKDKNGEEIAVLLMDTQGA 161
Query: 342 FDPNSTVRDSSIIFALSTLISSVQIYNLIGNLQEDDLQWLQLFTEYGKLLKNEDGSKAFQ 521
FD STV+D + IFALST+ISSVQIYNL N+QEDDLQ LQLFTEYG+L + SK FQ
Sbjct: 162 FDSQSTVKDCATIFALSTMISSVQIYNLSQNIQEDDLQHLQLFTEYGRLALEDSASKPFQ 221
Query: 522 MLMFLIRDWFYPYEHAFXXXXXXXXXXXXXXITDKMPKELCDLREHIRSCFDKVSCFLMP 701
L+FL+RDW +PYE F +++K EL LR+HIRSCF+ + CFLMP
Sbjct: 222 SLLFLVRDWSFPYEAEFGFQGGQRVLDRRLEVSEKQHAELQQLRQHIRSCFEDIRCFLMP 281
Query: 702 HPG 710
HPG
Sbjct: 282 HPG 284
>AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical
protein Y54G2A.2a protein.
Length = 573
Score = 253 bits (619), Expect = 1e-67
Identities = 128/243 (52%), Positives = 161/243 (66%), Gaps = 8/243 (3%)
Frame = +3
Query: 6 NHNYVLEXNALQRILLREDVKDLPLMVVSVVGAYRGGKSFLLNYFLRYLN--SPTEK--- 170
+H++ L L++ILL V D + V+ V GAYR GKSFLLN+FLRYL S +K
Sbjct: 43 DHSFELNTELLEKILLDPKVADKKVAVIGVAGAYRKGKSFLLNFFLRYLTWRSKADKVMG 102
Query: 171 --RNENGDWLGNETDPLVGFSWKGGFQRHT-GILMYSEPFITTTATGEKVAVLLMDTPGL 341
+N W+ + PL GFSW+GG +R T GIL++SEPFI GE++AVLLMDT G
Sbjct: 103 EVELDNSQWM-SPNSPLSGFSWRGGSERDTNGILIWSEPFIMKDKNGEEIAVLLMDTQGA 161
Query: 342 FDPNSTVRDSSIIFALSTLISSVQIYNLIGNLQEDDLQWLQLFTEYGKLLKNEDGSKAFQ 521
FD STV+D + IFALST+ISSVQIYNL N+QEDDLQ LQLFTEYG+L + SK FQ
Sbjct: 162 FDSQSTVKDCATIFALSTMISSVQIYNLSQNIQEDDLQHLQLFTEYGRLALEDSASKPFQ 221
Query: 522 MLMFLIRDWFYPYEHAFXXXXXXXXXXXXXXITDKMPKELCDLREHIRSCFDKVSCFLMP 701
L+FL+RDW +PYE F +++K EL LR+HIRSCF+ + CFLMP
Sbjct: 222 SLLFLVRDWSFPYEAEFGFQGGQRVLDRRLEVSEKQHAELQQLRQHIRSCFEDIRCFLMP 281
Query: 702 HPG 710
HPG
Sbjct: 282 HPG 284
>Z95559-2|CAB09000.3| 520|Caenorhabditis elegans Hypothetical
protein Y41E3.3 protein.
Length = 520
Score = 184 bits (448), Expect = 6e-47
Identities = 94/236 (39%), Positives = 143/236 (60%), Gaps = 5/236 (2%)
Frame = +3
Query: 21 LEXNALQRILLREDVKDLPLMVVSVVGAYRGGKSFLLNYFLRYLNS--PTEKRNENGDWL 194
L +AL +L + ++++SV GA+R GKSFLLN+FL YL S +++ + + +WL
Sbjct: 45 LNESALNSVLGHSACANKKIVIISVAGAFRKGKSFLLNFFLEYLYSLHKSQQSDSSLEWL 104
Query: 195 GNETDPLVGFSWKGGFQRHT-GILMYSEPFITTTATGEKVAVLLMDTPGLFDPNSTVRDS 371
++ L GF W+ G +R T GI ++ EP + + TGE AV+LMDT G FD NST +
Sbjct: 105 TDDCQ-LHGFHWRAGVKRDTVGIWLWGEPIMIESVTGEMFAVVLMDTQGTFDNNSTYQQC 163
Query: 372 SIIFALSTLISSVQIYNLIGNLQEDDLQWLQLFTEYGKLLKNE--DGSKAFQMLMFLIRD 545
+FALST++SSVQIYN++ N+QED LQ L LF EYG++ + + K FQ L+F +RD
Sbjct: 164 MTVFALSTIVSSVQIYNVVDNIQEDALQHLSLFVEYGRIAMEQPHNFGKPFQQLVFCVRD 223
Query: 546 WFYPYEHAFXXXXXXXXXXXXXXITDKMPKELCDLREHIRSCFDKVSCFLMPHPGF 713
+ E+ F + P+E+ +RE +R F+ + C+L+PHPG+
Sbjct: 224 FKNQEEYEFGENGGTDFLDNVLQTNPEQPEEIKQVRELLREYFEDIQCYLLPHPGY 279
>AC091125-1|AAK27889.2| 313|Caenorhabditis elegans Hypothetical
protein Y67D2.4 protein.
Length = 313
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Frame = +3
Query: 303 EKVAVLLMDTPGLFDPNSTVRDSSIIFALSTLI--SSVQIYNLIGNL-----QEDDLQWL 461
+K V ++DTPG+ PN + ++ A+ L+ S V +Y L L + +D +L
Sbjct: 167 DKPPVYIIDTPGVLSPNHRNVEDAMKLAMCDLVLESHVNLYYLADFLLFWLNRSEDFSYL 226
Query: 462 QLFTEYGKLLKNED 503
+L K KN +
Sbjct: 227 ELLGINQKFRKNSE 240
>Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical
protein T23D8.9a protein.
Length = 811
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 324 MDTPGLFDPNSTVRDSSIIFALSTLISSVQIYNLIGNLQEDDL 452
MDTPGL + ST+ S I+ + + + N+I ++++L
Sbjct: 631 MDTPGLLELRSTILRSFILLLRTPFVPKDGVLNVIDENRKENL 673
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,618,477
Number of Sequences: 27780
Number of extensions: 343909
Number of successful extensions: 854
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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